Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09335
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,958,602 | + | BWI76_RS09325 | 0.41 | -0.3 | |
1,958,769 | + | BWI76_RS09325 | 0.78 | -0.3 | |
1,959,352 | + | BWI76_RS09330 | 0.73 | -0.5 | |
1,959,433 | + | BWI76_RS09330 | 0.87 | -0.6 | |
1,959,775 | + | BWI76_RS09335 | 0.75 | -1.7 | |
1,959,901 | - | -0.9 | |||
1,960,048 | - | BWI76_RS09340 | 0.21 | -1.0 | |
1,960,156 | + | BWI76_RS09340 | 0.33 | +0.5 | |
1,960,366 | + | BWI76_RS09340 | 0.56 | +0.4 | |
1,960,416 | + | BWI76_RS09340 | 0.62 | -1.0 | |
1,960,429 | - | BWI76_RS09340 | 0.63 | -1.1 | |
1,960,434 | - | BWI76_RS09340 | 0.64 | +0.7 | |
1,960,554 | - | BWI76_RS09340 | 0.77 | +1.2 | |
1,960,618 | - | BWI76_RS09340 | 0.84 | +0.5 | |
1,960,701 | - | +0.4 | |||
1,960,815 | - | BWI76_RS09345 | 0.11 | +0.5 |
Or see this region's nucleotide sequence