Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06525
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,369,782 | - | BWI76_RS06520 | 0.70 | -0.7 | |
1,369,865 | - | BWI76_RS06520 | 0.76 | -1.1 | |
1,369,900 | - | BWI76_RS06520 | 0.79 | -0.2 | |
1,370,142 | + | -1.1 | |||
1,370,182 | + | -0.4 | |||
1,370,182 | + | -0.7 | |||
1,370,369 | + | -0.0 | |||
1,370,379 | - | -0.9 | |||
1,370,397 | - | -1.1 | |||
1,370,402 | - | -0.8 | |||
1,370,523 | + | -3.1 | |||
1,370,651 | + | BWI76_RS06525 | 0.26 | -2.6 | |
1,370,854 | - | BWI76_RS06525 | 0.59 | -0.7 | |
1,370,987 | - | BWI76_RS06525 | 0.80 | -1.5 | |
1,371,000 | + | BWI76_RS06525 | 0.82 | -2.7 | |
1,371,007 | + | BWI76_RS06525 | 0.83 | -3.6 | |
1,371,232 | + | -1.2 | |||
1,371,276 | + | -1.5 | |||
1,371,435 | - | BWI76_RS06530 | 0.15 | -0.7 | |
1,371,570 | - | BWI76_RS06530 | 0.26 | -2.5 | |
1,371,705 | + | BWI76_RS06530 | 0.36 | -1.2 | |
1,371,748 | - | BWI76_RS06530 | 0.40 | -1.2 |
Or see this region's nucleotide sequence