Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24240
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
5,051,542 | - | BWI76_RS24235 | 0.59 | +0.4 | |
5,051,806 | - | BWI76_RS24235 | 0.81 | +0.3 | |
5,051,860 | + | BWI76_RS24235 | 0.86 | -0.5 | |
5,051,869 | + | BWI76_RS24235 | 0.86 | -1.1 | |
5,051,869 | - | BWI76_RS24235 | 0.86 | -0.3 | |
5,051,892 | - | BWI76_RS24235 | 0.88 | +0.4 | |
5,051,947 | + | +0.0 | |||
5,051,959 | - | -0.2 | |||
5,051,970 | - | +0.4 | |||
5,051,987 | + | -0.2 | |||
5,052,194 | + | BWI76_RS24240 | 0.22 | -0.8 | |
5,052,414 | + | -0.8 | |||
5,052,453 | + | +0.7 | |||
5,052,818 | - | BWI76_RS24245 | 0.28 | -1.1 | |
5,052,977 | - | BWI76_RS24245 | 0.36 | -3.2 | |
5,053,002 | + | BWI76_RS24245 | 0.38 | -2.0 | |
5,053,021 | + | BWI76_RS24245 | 0.39 | +0.3 | |
5,053,088 | + | BWI76_RS24245 | 0.42 | -0.1 |
Or see this region's nucleotide sequence