Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23925
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,992,264 | - | BWI76_RS23920 | 0.60 | +0.9 | |
4,992,658 | + | -1.4 | |||
4,992,671 | + | -1.7 | |||
4,992,746 | + | -1.4 | |||
4,992,746 | + | -0.1 | |||
4,992,802 | - | +0.9 | |||
4,993,048 | + | -2.0 | |||
4,993,057 | + | -0.7 | |||
4,993,407 | + | BWI76_RS23925 | 0.58 | -1.4 | |
4,993,628 | + | -0.1 | |||
4,993,845 | + | -0.6 | |||
4,993,877 | - | -1.2 | |||
4,993,885 | - | +0.0 | |||
4,993,904 | + | +1.0 | |||
4,994,015 | + | BWI76_RS23930 | 0.18 | +0.0 | |
4,994,269 | + | BWI76_RS23930 | 0.46 | +0.2 | |
4,994,288 | + | BWI76_RS23930 | 0.48 | +0.1 | |
4,994,357 | + | BWI76_RS23930 | 0.56 | -1.1 | |
4,994,402 | + | BWI76_RS23930 | 0.61 | -1.2 |
Or see this region's nucleotide sequence