Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22425
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,675,258 | + | BWI76_RS22420 | 0.25 | -1.4 | |
4,676,162 | - | -0.7 | |||
4,676,162 | - | +1.1 | |||
4,676,183 | + | -0.6 | |||
4,676,191 | - | -0.1 | |||
4,676,220 | - | -2.9 | |||
4,676,463 | - | BWI76_RS22425 | 0.33 | +0.3 | |
4,676,521 | + | BWI76_RS22425 | 0.39 | -0.7 | |
4,676,646 | - | BWI76_RS22425 | 0.53 | +0.3 | |
4,676,724 | - | BWI76_RS22425 | 0.62 | +0.7 | |
4,676,764 | - | BWI76_RS22425 | 0.66 | +0.1 | |
4,676,816 | - | BWI76_RS22425 | 0.72 | +2.3 | |
4,677,107 | + | +1.8 | |||
4,677,363 | + | BWI76_RS22430 | 0.35 | +0.4 | |
4,677,648 | + | BWI76_RS22430 | 0.70 | -0.5 | |
4,677,811 | + | BWI76_RS22430 | 0.90 | -1.1 | |
4,677,819 | - | -0.8 | |||
4,678,036 | + | BWI76_RS22435 | 0.17 | +1.0 |
Or see this region's nucleotide sequence