Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19685
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,112,819 | - | BWI76_RS19680 | 0.74 | +0.5 | |
4,112,907 | - | BWI76_RS19680 | 0.79 | -2.4 | |
4,113,144 | - | +1.9 | |||
4,113,154 | - | +0.3 | |||
4,113,320 | + | -0.3 | |||
4,113,450 | + | +0.3 | |||
4,113,607 | + | +2.3 | |||
4,113,697 | - | -1.3 | |||
4,113,753 | - | -3.5 | |||
4,113,815 | - | BWI76_RS19685 | 0.12 | -2.3 | |
4,113,858 | + | BWI76_RS19685 | 0.15 | +0.9 | |
4,113,935 | - | BWI76_RS19685 | 0.20 | -2.8 | |
4,114,351 | - | BWI76_RS19685 | 0.49 | -1.1 | |
4,114,361 | + | BWI76_RS19685 | 0.49 | -2.1 | |
4,114,706 | - | BWI76_RS19685 | 0.73 | -0.7 | |
4,114,810 | - | BWI76_RS19685 | 0.80 | -1.9 | |
4,114,820 | + | BWI76_RS19685 | 0.81 | -0.7 | |
4,114,935 | + | BWI76_RS19685 | 0.89 | -1.4 | |
4,114,943 | - | BWI76_RS19685 | 0.89 | -0.1 | |
4,115,149 | - | -0.3 | |||
4,115,558 | - | BWI76_RS19690 | 0.34 | +1.9 | |
4,116,025 | - | BWI76_RS19690 | 0.88 | +0.3 |
Or see this region's nucleotide sequence