Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16205
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 3,361,714 | + | BWI76_RS16200 | 0.60 | +0.1 | |
| 3,361,912 | + | BWI76_RS16200 | 0.74 | -0.9 | |
| 3,361,920 | - | BWI76_RS16200 | 0.74 | +1.1 | |
| 3,362,174 | - | +1.1 | |||
| 3,362,182 | + | +1.1 | |||
| 3,362,246 | + | -2.6 | |||
| 3,362,250 | - | +0.8 | |||
| 3,362,283 | + | -1.3 | |||
| 3,362,291 | - | -1.5 | |||
| 3,362,404 | + | +0.9 | |||
| 3,362,457 | + | BWI76_RS16205 | 0.11 | +2.1 | |
| 3,362,797 | + | BWI76_RS16205 | 0.33 | +1.3 | |
| 3,363,199 | + | BWI76_RS16205 | 0.60 | +0.3 | |
| 3,363,293 | + | BWI76_RS16205 | 0.66 | +0.6 | |
| 3,363,315 | - | BWI76_RS16205 | 0.67 | +0.5 | |
| 3,363,786 | - | +0.5 | |||
| 3,363,893 | + | +2.7 | |||
| 3,364,072 | + | +1.6 | |||
| 3,364,250 | + | BWI76_RS16210 | 0.50 | -0.4 | |
| 3,364,318 | - | BWI76_RS16210 | 0.87 | -2.4 | |
| 3,364,356 | + | +1.0 | |||
| 3,364,364 | - | +1.1 | |||
| 3,364,458 | + | BWI76_RS16215 | 0.13 | +2.0 | |
| 3,364,581 | - | BWI76_RS16215 | 0.26 | -0.5 | |
| 3,364,813 | + | BWI76_RS16215 | 0.50 | -0.8 |
Or see this region's nucleotide sequence