Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16055
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,327,330 | + | BWI76_RS16045 | 0.67 | -0.2 | |
3,327,471 | + | BWI76_RS16045 | 0.82 | +1.2 | |
3,327,735 | + | BWI76_RS16050 | 0.14 | -0.9 | |
3,327,812 | - | BWI76_RS16050 | 0.26 | +0.4 | |
3,327,883 | - | BWI76_RS16050 | 0.38 | +1.0 | |
3,328,433 | - | BWI76_RS16055 | 0.18 | +1.5 | |
3,328,607 | + | BWI76_RS16055 | 0.38 | +0.9 | |
3,328,703 | + | BWI76_RS16055 | 0.48 | -0.1 | |
3,328,905 | + | BWI76_RS16055 | 0.71 | +1.7 | |
3,328,913 | - | BWI76_RS16055 | 0.72 | +1.0 | |
3,328,942 | - | BWI76_RS16055 | 0.75 | +0.6 | |
3,329,424 | + | BWI76_RS16060 | 0.29 | +0.1 | |
3,329,432 | - | BWI76_RS16060 | 0.30 | +0.2 | |
3,329,522 | + | BWI76_RS16060 | 0.39 | +0.5 | |
3,329,564 | + | BWI76_RS16060 | 0.44 | -0.6 | |
3,329,756 | - | BWI76_RS16060 | 0.65 | -0.8 | |
3,329,948 | - | +1.2 |
Or see this region's nucleotide sequence