Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16045
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,326,371 | + | BWI76_RS16040 | 0.77 | +0.3 | |
3,326,379 | - | BWI76_RS16040 | 0.78 | +0.6 | |
3,326,517 | + | -1.0 | |||
3,326,525 | - | -0.4 | |||
3,326,580 | - | -0.4 | |||
3,326,582 | + | +0.6 | |||
3,326,841 | - | BWI76_RS16045 | 0.16 | -0.3 | |
3,327,330 | + | BWI76_RS16045 | 0.67 | -0.2 | |
3,327,471 | + | BWI76_RS16045 | 0.82 | +1.2 | |
3,327,735 | + | BWI76_RS16050 | 0.14 | -0.9 | |
3,327,812 | - | BWI76_RS16050 | 0.26 | +0.4 | |
3,327,883 | - | BWI76_RS16050 | 0.38 | +1.0 | |
3,328,433 | - | BWI76_RS16055 | 0.18 | +1.5 | |
3,328,607 | + | BWI76_RS16055 | 0.38 | +0.9 |
Or see this region's nucleotide sequence