Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13805
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,878,925 | + | BWI76_RS13800 | 0.43 | -0.4 | |
| 2,878,968 | + | BWI76_RS13800 | 0.47 | +0.6 | |
| 2,879,023 | + | BWI76_RS13800 | 0.52 | +0.1 | |
| 2,879,287 | - | BWI76_RS13800 | 0.78 | -1.0 | |
| 2,879,342 | - | BWI76_RS13800 | 0.84 | -0.6 | |
| 2,879,566 | - | -1.2 | |||
| 2,880,291 | - | BWI76_RS13805 | 0.89 | +0.6 | |
| 2,880,291 | - | BWI76_RS13805 | 0.89 | +1.5 | |
| 2,880,417 | + | +0.1 | |||
| 2,880,422 | + | -2.3 | |||
| 2,880,450 | + | +2.6 | |||
| 2,880,671 | + | BWI76_RS13810 | 0.12 | +0.7 | |
| 2,880,786 | - | BWI76_RS13810 | 0.24 | -1.2 | |
| 2,880,800 | + | BWI76_RS13810 | 0.25 | -2.9 | |
| 2,880,882 | - | BWI76_RS13810 | 0.34 | -2.0 | |
| 2,880,927 | - | BWI76_RS13810 | 0.38 | +0.0 | |
| 2,881,072 | + | BWI76_RS13810 | 0.54 | +0.4 | |
| 2,881,107 | - | BWI76_RS13810 | 0.57 | -0.2 |
Or see this region's nucleotide sequence