Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12445
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,600,564 | + | BWI76_RS12440 | 0.31 | +0.1 | |
2,600,739 | - | BWI76_RS12440 | 0.43 | -2.1 | |
2,600,821 | + | BWI76_RS12440 | 0.49 | -1.3 | |
2,600,980 | - | BWI76_RS12440 | 0.61 | +2.0 | |
2,601,066 | - | BWI76_RS12440 | 0.67 | +0.5 | |
2,601,192 | + | BWI76_RS12440 | 0.76 | +0.6 | |
2,601,304 | - | BWI76_RS12440 | 0.84 | -0.4 | |
2,601,352 | - | BWI76_RS12440 | 0.87 | +0.2 | |
2,601,411 | + | +0.8 | |||
2,601,442 | - | -0.7 | |||
2,601,473 | + | +0.6 | |||
2,601,655 | - | BWI76_RS12445 | 0.14 | -0.4 | |
2,601,837 | + | BWI76_RS12445 | 0.33 | -0.6 | |
2,601,993 | + | BWI76_RS12445 | 0.49 | -3.0 | |
2,602,265 | + | BWI76_RS12445 | 0.77 | -1.7 | |
2,602,423 | + | +1.6 | |||
2,602,826 | + | BWI76_RS12450 | 0.25 | -1.4 | |
2,603,123 | + | BWI76_RS12450 | 0.69 | -0.9 |
Or see this region's nucleotide sequence