Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09970
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,098,178 | - | -0.3 | |||
2,098,290 | - | -2.5 | |||
2,098,489 | - | BWI76_RS09970 | 0.25 | -2.1 | |
2,098,743 | - | BWI76_RS09970 | 0.49 | +1.0 | |
2,099,339 | - | -1.5 | |||
2,099,339 | - | -2.0 | |||
2,099,439 | - | -2.1 | |||
2,099,723 | + | BWI76_RS09975 | 0.15 | -0.2 | |
2,099,724 | + | BWI76_RS09975 | 0.15 | +0.0 | |
2,099,725 | + | BWI76_RS09975 | 0.15 | -3.5 | |
2,099,797 | - | BWI76_RS09975 | 0.30 | +0.2 | |
2,099,893 | + | BWI76_RS09975 | 0.48 | +1.0 | |
2,099,893 | + | BWI76_RS09975 | 0.48 | +1.2 | |
2,099,901 | - | BWI76_RS09975 | 0.50 | -2.1 | |
2,100,118 | - | +0.2 | |||
2,100,153 | - | +0.2 | |||
2,100,191 | + | +1.6 | |||
2,100,206 | + | -0.3 | |||
2,100,281 | + | -0.5 |
Or see this region's nucleotide sequence