Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09790
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,052,284 | + | -0.9 | |||
2,052,704 | - | -1.6 | |||
2,052,887 | - | +0.5 | |||
2,052,918 | + | -0.1 | |||
2,052,962 | + | -0.5 | |||
2,053,199 | + | BWI76_RS09790 | 0.16 | +0.2 | |
2,053,214 | + | BWI76_RS09790 | 0.17 | -0.4 | |
2,053,229 | + | BWI76_RS09790 | 0.18 | +0.1 | |
2,053,264 | - | BWI76_RS09790 | 0.19 | +0.5 | |
2,053,550 | - | BWI76_RS09790 | 0.32 | +0.6 | |
2,053,658 | - | BWI76_RS09790 | 0.37 | -2.4 | |
2,053,658 | - | BWI76_RS09790 | 0.37 | -0.0 | |
2,053,959 | - | BWI76_RS09790 | 0.50 | -0.5 | |
2,054,203 | + | BWI76_RS09790 | 0.61 | +0.0 | |
2,054,360 | - | BWI76_RS09790 | 0.68 | +0.6 | |
2,054,500 | + | BWI76_RS09790 | 0.74 | +0.3 | |
2,054,560 | - | BWI76_RS09790 | 0.77 | +0.1 | |
2,054,668 | - | BWI76_RS09790 | 0.81 | +0.0 | |
2,054,733 | - | BWI76_RS09790 | 0.84 | -1.3 | |
2,054,852 | - | BWI76_RS09790 | 0.89 | -0.3 | |
2,054,858 | - | BWI76_RS09790 | 0.90 | +1.3 | |
2,054,914 | - | -0.4 |
Or see this region's nucleotide sequence