Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09595
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,006,654 | + | BWI76_RS09590 | 0.61 | -0.1 | |
2,006,665 | - | BWI76_RS09590 | 0.61 | +0.8 | |
2,006,788 | + | BWI76_RS09590 | 0.69 | -3.4 | |
2,006,938 | + | BWI76_RS09590 | 0.78 | +1.9 | |
2,007,241 | + | -2.1 | |||
2,007,303 | + | -0.2 | |||
2,007,311 | - | -0.0 | |||
2,007,332 | + | +0.8 | |||
2,007,340 | - | -0.1 | |||
2,007,360 | - | +1.6 | |||
2,007,360 | - | -0.0 | |||
2,007,375 | - | +0.1 | |||
2,007,459 | + | +0.0 | |||
2,007,545 | - | -1.3 | |||
2,007,616 | + | BWI76_RS09595 | 0.12 | -0.8 | |
2,007,915 | - | BWI76_RS09595 | 0.39 | -0.9 | |
2,008,219 | + | BWI76_RS09595 | 0.66 | -0.2 | |
2,008,422 | + | BWI76_RS09595 | 0.84 | -3.6 | |
2,008,669 | - | -1.8 | |||
2,008,822 | + | BWI76_RS09600 | 0.12 | -2.7 | |
2,009,085 | - | BWI76_RS09600 | 0.25 | -0.7 | |
2,009,174 | - | BWI76_RS09600 | 0.30 | -2.5 | |
2,009,179 | - | BWI76_RS09600 | 0.30 | -2.8 | |
2,009,291 | - | BWI76_RS09600 | 0.36 | -1.3 | |
2,009,342 | - | BWI76_RS09600 | 0.38 | +0.0 |
Or see this region's nucleotide sequence