Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08640
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,822,063 | - | +0.8 | |||
1,822,231 | + | BWI76_RS08635 | 0.18 | +1.0 | |
1,822,565 | + | BWI76_RS08635 | 0.60 | -1.6 | |
1,822,640 | + | BWI76_RS08635 | 0.70 | +1.1 | |
1,822,661 | + | BWI76_RS08635 | 0.73 | -0.5 | |
1,822,711 | - | BWI76_RS08635 | 0.79 | +0.3 | |
1,822,792 | - | BWI76_RS08635 | 0.89 | +0.0 | |
1,822,807 | + | +0.3 | |||
1,822,959 | + | +0.5 | |||
1,823,024 | - | +1.4 | |||
1,823,066 | + | BWI76_RS08640 | 0.24 | -1.5 | |
1,823,226 | + | +1.2 | |||
1,823,234 | - | -0.8 | |||
1,823,336 | + | +0.1 | |||
1,823,433 | + | BWI76_RS08645 | 0.14 | +1.0 | |
1,823,441 | - | BWI76_RS08645 | 0.15 | +0.7 | |
1,823,906 | + | BWI76_RS08645 | 0.75 | +0.3 | |
1,824,126 | + | +0.6 | |||
1,824,170 | - | BWI76_RS08650 | 0.11 | +0.3 |
Or see this region's nucleotide sequence