Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00155

Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS00145 and BWI76_RS00150 are separated by 47 nucleotidesBWI76_RS00150 and BWI76_RS00155 overlap by 1 nucleotidesBWI76_RS00155 and BWI76_RS00160 are separated by 135 nucleotides BWI76_RS00145: BWI76_RS00145 - phosphate ABC transporter ATP-binding protein, at 27,965 to 28,738 _RS00145 BWI76_RS00150: BWI76_RS00150 - phosphate transporter permease subunit PtsA, at 28,786 to 29,676 _RS00150 BWI76_RS00155: BWI76_RS00155 - phosphate transporter permease subunit PstC, at 29,676 to 30,635 _RS00155 BWI76_RS00160: BWI76_RS00160 - phosphate ABC transporter substrate-binding protein, at 30,771 to 31,811 _RS00160 Position (kb) 29 30 31Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 29.661 kb on - strandat 29.795 kb on - strand, within BWI76_RS00155at 30.682 kb on - strandat 30.805 kb on - strandat 31.154 kb on - strand, within BWI76_RS00160

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
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29,661 - -2.5
29,795 - BWI76_RS00155 0.12 -0.5
30,682 - -1.5
30,805 - -4.0
31,154 - BWI76_RS00160 0.37 +0.6

Or see this region's nucleotide sequence