Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19385
Experiment: Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL |
|---|---|---|---|---|---|
| remove | |||||
| 4,039,865 | + | BWI76_RS19380 | 0.44 | -1.7 | |
| 4,039,906 | - | BWI76_RS19380 | 0.49 | +0.0 | |
| 4,040,019 | + | BWI76_RS19380 | 0.64 | +0.1 | |
| 4,040,225 | + | -0.6 | |||
| 4,040,298 | - | -1.4 | |||
| 4,040,406 | + | -0.6 | |||
| 4,040,496 | + | -0.2 | |||
| 4,040,496 | + | +1.4 | |||
| 4,040,504 | - | +0.3 | |||
| 4,040,504 | - | -0.5 | |||
| 4,040,514 | - | -0.4 | |||
| 4,040,867 | - | BWI76_RS19385 | 0.10 | +0.9 | |
| 4,041,393 | - | BWI76_RS19385 | 0.37 | -1.4 | |
| 4,041,588 | + | BWI76_RS19385 | 0.47 | -3.5 | |
| 4,041,588 | + | BWI76_RS19385 | 0.47 | +1.2 | |
| 4,041,715 | + | BWI76_RS19385 | 0.53 | +0.5 | |
| 4,041,744 | + | BWI76_RS19385 | 0.55 | +0.7 | |
| 4,041,752 | - | BWI76_RS19385 | 0.55 | +0.6 | |
| 4,042,060 | - | BWI76_RS19385 | 0.71 | +0.6 | |
| 4,042,086 | - | BWI76_RS19385 | 0.72 | +0.5 | |
| 4,042,184 | - | BWI76_RS19385 | 0.77 | +0.1 | |
| 4,042,264 | - | BWI76_RS19385 | 0.81 | +0.2 | |
| 4,042,414 | + | BWI76_RS19385 | 0.89 | +0.8 | |
| 4,042,529 | - | +0.6 | |||
| 4,042,674 | - | -1.1 | |||
| 4,043,242 | - | +0.7 | |||
| 4,043,285 | + | -1.4 | |||
| 4,043,405 | + | +0.3 |
Or see this region's nucleotide sequence