Experiment: Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17780 and BWI76_RS17785 are separated by 23 nucleotides BWI76_RS17785 and BWI76_RS17790 are separated by 3 nucleotides BWI76_RS17790 and BWI76_RS17795 are separated by 68 nucleotides
BWI76_RS17780: BWI76_RS17780 - septum formation inhibitor, at 3,696,056 to 3,696,754
_RS17780
BWI76_RS17785: BWI76_RS17785 - septum site-determining protein MinD, at 3,696,778 to 3,697,590
_RS17785
BWI76_RS17790: BWI76_RS17790 - cell division topological specificity factor, at 3,697,594 to 3,697,863
_RS17790
BWI76_RS17795: BWI76_RS17795 - ribonuclease D, at 3,697,932 to 3,699,059
_RS17795
Position (kb)
3697
3698 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3696.720 kb on - strand at 3696.851 kb on - strand at 3696.914 kb on - strand, within BWI76_RS17785 at 3697.023 kb on + strand, within BWI76_RS17785 at 3697.078 kb on + strand, within BWI76_RS17785 at 3697.086 kb on - strand, within BWI76_RS17785 at 3697.210 kb on - strand, within BWI76_RS17785 at 3697.436 kb on + strand, within BWI76_RS17785 at 3697.436 kb on + strand, within BWI76_RS17785 at 3697.436 kb on + strand, within BWI76_RS17785 at 3697.444 kb on - strand, within BWI76_RS17785 at 3697.925 kb on + strand at 3698.089 kb on - strand, within BWI76_RS17795 at 3698.670 kb on - strand, within BWI76_RS17795 at 3698.717 kb on - strand, within BWI76_RS17795
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL remove 3,696,720 - -1.7 3,696,851 - -0.4 3,696,914 - BWI76_RS17785 0.17 -0.9 3,697,023 + BWI76_RS17785 0.30 -1.4 3,697,078 + BWI76_RS17785 0.37 -1.1 3,697,086 - BWI76_RS17785 0.38 -1.1 3,697,210 - BWI76_RS17785 0.53 +0.9 3,697,436 + BWI76_RS17785 0.81 -2.2 3,697,436 + BWI76_RS17785 0.81 -1.7 3,697,436 + BWI76_RS17785 0.81 -1.4 3,697,444 - BWI76_RS17785 0.82 -1.6 3,697,925 + -0.6 3,698,089 - BWI76_RS17795 0.14 +1.0 3,698,670 - BWI76_RS17795 0.65 +0.6 3,698,717 - BWI76_RS17795 0.70 +1.9
Or see this region's nucleotide sequence