Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16750

Experiment: Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS16740 and BWI76_RS16745 are separated by 106 nucleotidesBWI76_RS16745 and BWI76_RS16750 are separated by 10 nucleotidesBWI76_RS16750 and BWI76_RS16755 are separated by 23 nucleotidesBWI76_RS16755 and BWI76_RS16760 are separated by 57 nucleotides BWI76_RS16740: BWI76_RS16740 - transcriptional regulator, at 3,467,493 to 3,468,365 _RS16740 BWI76_RS16745: BWI76_RS16745 - alpha-acetolactate decarboxylase, at 3,468,472 to 3,469,251 _RS16745 BWI76_RS16750: BWI76_RS16750 - acetolactate synthase, at 3,469,262 to 3,470,941 _RS16750 BWI76_RS16755: BWI76_RS16755 - acetoin reductase, at 3,470,965 to 3,471,735 _RS16755 BWI76_RS16760: BWI76_RS16760 - lipase, at 3,471,793 to 3,472,863 _RS16760 Position (kb) 3469 3470 3471Strain fitness (log2 ratio) -2 -1 0 1 2at 3468.518 kb on - strandat 3468.524 kb on - strandat 3468.549 kb on - strandat 3468.559 kb on + strand, within BWI76_RS16745at 3468.576 kb on - strand, within BWI76_RS16745at 3468.576 kb on - strand, within BWI76_RS16745at 3468.585 kb on + strand, within BWI76_RS16745at 3468.585 kb on + strand, within BWI76_RS16745at 3468.800 kb on + strand, within BWI76_RS16745at 3469.030 kb on - strand, within BWI76_RS16745at 3469.079 kb on + strand, within BWI76_RS16745at 3469.307 kb on - strandat 3469.523 kb on - strand, within BWI76_RS16750at 3469.701 kb on - strand, within BWI76_RS16750at 3469.998 kb on - strand, within BWI76_RS16750at 3470.542 kb on - strand, within BWI76_RS16750at 3470.625 kb on - strand, within BWI76_RS16750at 3470.627 kb on + strand, within BWI76_RS16750at 3470.662 kb on + strand, within BWI76_RS16750at 3470.746 kb on + strand, within BWI76_RS16750at 3470.925 kb on - strandat 3471.142 kb on - strand, within BWI76_RS16755at 3471.229 kb on - strand, within BWI76_RS16755at 3471.754 kb on - strandat 3471.859 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL
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3,468,518 - +1.0
3,468,524 - +0.9
3,468,549 - +0.7
3,468,559 + BWI76_RS16745 0.11 +1.2
3,468,576 - BWI76_RS16745 0.13 +0.9
3,468,576 - BWI76_RS16745 0.13 +0.0
3,468,585 + BWI76_RS16745 0.14 +2.0
3,468,585 + BWI76_RS16745 0.14 +0.9
3,468,800 + BWI76_RS16745 0.42 +0.6
3,469,030 - BWI76_RS16745 0.72 -2.1
3,469,079 + BWI76_RS16745 0.78 +0.9
3,469,307 - +0.4
3,469,523 - BWI76_RS16750 0.16 +0.4
3,469,701 - BWI76_RS16750 0.26 -0.8
3,469,998 - BWI76_RS16750 0.44 +0.7
3,470,542 - BWI76_RS16750 0.76 -0.2
3,470,625 - BWI76_RS16750 0.81 -0.8
3,470,627 + BWI76_RS16750 0.81 +0.3
3,470,662 + BWI76_RS16750 0.83 -0.7
3,470,746 + BWI76_RS16750 0.88 -0.3
3,470,925 - -0.4
3,471,142 - BWI76_RS16755 0.23 -0.2
3,471,229 - BWI76_RS16755 0.34 -0.6
3,471,754 - +0.4
3,471,859 - -0.4

Or see this region's nucleotide sequence