Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23615 and BWI76_RS23620 overlap by 4 nucleotides BWI76_RS23620 and BWI76_RS23625 overlap by 4 nucleotides
BWI76_RS23615: BWI76_RS23615 - multidrug transporter, at 4,923,292 to 4,925,235
_RS23615
BWI76_RS23620: BWI76_RS23620 - multidrug resistance transporter, at 4,925,232 to 4,926,710
_RS23620
BWI76_RS23625: BWI76_RS23625 - helix-turn-helix transcriptional regulator, at 4,926,707 to 4,929,418
_RS23625
Position (kb) 4925
4926
4927 Strain fitness (log2 ratio) -2
-1
0
1 at 4924.341 kb on + strand, within BWI76_RS23615 at 4924.520 kb on - strand, within BWI76_RS23615 at 4924.589 kb on + strand, within BWI76_RS23615 at 4924.682 kb on - strand, within BWI76_RS23615 at 4924.700 kb on + strand, within BWI76_RS23615 at 4924.717 kb on + strand, within BWI76_RS23615 at 4924.725 kb on - strand, within BWI76_RS23615 at 4924.802 kb on - strand, within BWI76_RS23615 at 4924.876 kb on + strand, within BWI76_RS23615 at 4924.909 kb on - strand, within BWI76_RS23615 at 4925.081 kb on + strand at 4925.393 kb on - strand, within BWI76_RS23620 at 4925.566 kb on - strand, within BWI76_RS23620 at 4925.596 kb on + strand, within BWI76_RS23620 at 4925.604 kb on - strand, within BWI76_RS23620 at 4925.802 kb on - strand, within BWI76_RS23620 at 4925.833 kb on - strand, within BWI76_RS23620 at 4925.894 kb on - strand, within BWI76_RS23620 at 4925.900 kb on + strand, within BWI76_RS23620 at 4925.901 kb on - strand, within BWI76_RS23620 at 4926.115 kb on + strand, within BWI76_RS23620 at 4926.115 kb on + strand, within BWI76_RS23620 at 4926.285 kb on - strand, within BWI76_RS23620 at 4926.392 kb on + strand, within BWI76_RS23620 at 4926.637 kb on + strand at 4926.694 kb on - strand at 4926.841 kb on + strand at 4927.036 kb on + strand, within BWI76_RS23625 at 4927.176 kb on + strand, within BWI76_RS23625 at 4927.191 kb on - strand, within BWI76_RS23625 at 4927.229 kb on - strand, within BWI76_RS23625 at 4927.540 kb on + strand, within BWI76_RS23625 at 4927.614 kb on - strand, within BWI76_RS23625 at 4927.647 kb on - strand, within BWI76_RS23625 at 4927.688 kb on - strand, within BWI76_RS23625
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 4,924,341 + BWI76_RS23615 0.54 -0.0 4,924,520 - BWI76_RS23615 0.63 +0.4 4,924,589 + BWI76_RS23615 0.67 -0.4 4,924,682 - BWI76_RS23615 0.72 -0.6 4,924,700 + BWI76_RS23615 0.72 +0.3 4,924,717 + BWI76_RS23615 0.73 -0.1 4,924,725 - BWI76_RS23615 0.74 +0.5 4,924,802 - BWI76_RS23615 0.78 -0.9 4,924,876 + BWI76_RS23615 0.81 +0.2 4,924,909 - BWI76_RS23615 0.83 +0.6 4,925,081 + -0.8 4,925,393 - BWI76_RS23620 0.11 +0.4 4,925,566 - BWI76_RS23620 0.23 +0.3 4,925,596 + BWI76_RS23620 0.25 +0.1 4,925,604 - BWI76_RS23620 0.25 +0.6 4,925,802 - BWI76_RS23620 0.39 +0.3 4,925,833 - BWI76_RS23620 0.41 +0.8 4,925,894 - BWI76_RS23620 0.45 +0.8 4,925,900 + BWI76_RS23620 0.45 +1.2 4,925,901 - BWI76_RS23620 0.45 -0.1 4,926,115 + BWI76_RS23620 0.60 +0.9 4,926,115 + BWI76_RS23620 0.60 -0.8 4,926,285 - BWI76_RS23620 0.71 +0.4 4,926,392 + BWI76_RS23620 0.78 +0.1 4,926,637 + +1.0 4,926,694 - +0.0 4,926,841 + +0.1 4,927,036 + BWI76_RS23625 0.12 -0.9 4,927,176 + BWI76_RS23625 0.17 -1.5 4,927,191 - BWI76_RS23625 0.18 -0.5 4,927,229 - BWI76_RS23625 0.19 +1.0 4,927,540 + BWI76_RS23625 0.31 -2.7 4,927,614 - BWI76_RS23625 0.33 -0.6 4,927,647 - BWI76_RS23625 0.35 +1.3 4,927,688 - BWI76_RS23625 0.36 +0.2
Or see this region's nucleotide sequence