Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08100 and BWI76_RS08105 overlap by 1 nucleotides BWI76_RS08105 and BWI76_RS08110 are separated by 163 nucleotides BWI76_RS08110 and BWI76_RS08115 are separated by 356 nucleotides
BWI76_RS08100: BWI76_RS08100 - glutamate/aspartate transporter permease GltK, at 1,717,092 to 1,717,766
_RS08100
BWI76_RS08105: BWI76_RS08105 - glutamate/aspartate ABC transporter permease GltJ, at 1,717,766 to 1,718,506
_RS08105
BWI76_RS08110: BWI76_RS08110 - glutamate/aspartate ABC transporter substrate-binding protein, at 1,718,670 to 1,719,581
_RS08110
BWI76_RS08115: BWI76_RS08115 - apolipoprotein N-acyltransferase, at 1,719,938 to 1,721,476
_RS08115
Position (kb)
1718
1719
1720 Strain fitness (log2 ratio)
-1
0
1 at 1717.699 kb on + strand at 1717.856 kb on + strand, within BWI76_RS08105 at 1717.883 kb on + strand, within BWI76_RS08105 at 1717.906 kb on - strand, within BWI76_RS08105 at 1718.024 kb on - strand, within BWI76_RS08105 at 1718.034 kb on - strand, within BWI76_RS08105 at 1718.122 kb on + strand, within BWI76_RS08105 at 1718.210 kb on - strand, within BWI76_RS08105 at 1718.244 kb on - strand, within BWI76_RS08105 at 1718.333 kb on + strand, within BWI76_RS08105 at 1718.416 kb on + strand, within BWI76_RS08105 at 1718.703 kb on - strand at 1719.091 kb on - strand, within BWI76_RS08110 at 1719.115 kb on + strand, within BWI76_RS08110 at 1719.115 kb on + strand, within BWI76_RS08110 at 1719.377 kb on + strand, within BWI76_RS08110
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 1,717,699 + -1.5 1,717,856 + BWI76_RS08105 0.12 -1.7 1,717,883 + BWI76_RS08105 0.16 +0.2 1,717,906 - BWI76_RS08105 0.19 +1.1 1,718,024 - BWI76_RS08105 0.35 +0.3 1,718,034 - BWI76_RS08105 0.36 +1.6 1,718,122 + BWI76_RS08105 0.48 -1.5 1,718,210 - BWI76_RS08105 0.60 -0.8 1,718,244 - BWI76_RS08105 0.65 -0.5 1,718,333 + BWI76_RS08105 0.77 -0.2 1,718,416 + BWI76_RS08105 0.88 -0.7 1,718,703 - +0.5 1,719,091 - BWI76_RS08110 0.46 -1.1 1,719,115 + BWI76_RS08110 0.49 +0.3 1,719,115 + BWI76_RS08110 0.49 -1.5 1,719,377 + BWI76_RS08110 0.78 -1.5
Or see this region's nucleotide sequence