Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26770 and BWI76_RS26775 overlap by 19 nucleotides BWI76_RS26775 and BWI76_RS26780 are separated by 3 nucleotides
BWI76_RS26770: BWI76_RS26770 - cellulose biosynthesis protein BcsC, at 5,546,375 to 5,549,860
_RS26770
BWI76_RS26775: BWI76_RS26775 - endo-1,4-D-glucanase, at 5,549,842 to 5,550,951
_RS26775
BWI76_RS26780: BWI76_RS26780 - cellulose synthase regulator BcsB, at 5,550,955 to 5,553,288
_RS26780
Position (kb) 5549
5550
5551 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5548.917 kb on + strand, within BWI76_RS26770 at 5548.917 kb on + strand, within BWI76_RS26770 at 5548.925 kb on - strand, within BWI76_RS26770 at 5549.185 kb on - strand, within BWI76_RS26770 at 5549.567 kb on - strand at 5549.668 kb on + strand at 5549.771 kb on + strand at 5549.832 kb on - strand at 5549.938 kb on + strand at 5549.961 kb on - strand, within BWI76_RS26775 at 5550.115 kb on + strand, within BWI76_RS26775 at 5550.227 kb on - strand, within BWI76_RS26775 at 5550.407 kb on - strand, within BWI76_RS26775 at 5550.585 kb on - strand, within BWI76_RS26775 at 5550.594 kb on + strand, within BWI76_RS26775 at 5550.627 kb on - strand, within BWI76_RS26775 at 5550.637 kb on - strand, within BWI76_RS26775 at 5550.639 kb on - strand, within BWI76_RS26775 at 5550.726 kb on + strand, within BWI76_RS26775 at 5550.763 kb on + strand, within BWI76_RS26775 at 5550.768 kb on + strand, within BWI76_RS26775 at 5550.887 kb on + strand at 5551.134 kb on + strand at 5551.540 kb on - strand, within BWI76_RS26780 at 5551.766 kb on + strand, within BWI76_RS26780 at 5551.771 kb on + strand, within BWI76_RS26780 at 5551.771 kb on + strand, within BWI76_RS26780 at 5551.779 kb on - strand, within BWI76_RS26780 at 5551.779 kb on - strand, within BWI76_RS26780 at 5551.790 kb on + strand, within BWI76_RS26780 at 5551.790 kb on + strand, within BWI76_RS26780 at 5551.798 kb on - strand, within BWI76_RS26780 at 5551.940 kb on + strand, within BWI76_RS26780
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 5,548,917 + BWI76_RS26770 0.73 +0.4 5,548,917 + BWI76_RS26770 0.73 +1.0 5,548,925 - BWI76_RS26770 0.73 -0.4 5,549,185 - BWI76_RS26770 0.81 +1.2 5,549,567 - +0.2 5,549,668 + +0.6 5,549,771 + +0.9 5,549,832 - -1.3 5,549,938 + -0.3 5,549,961 - BWI76_RS26775 0.11 -1.2 5,550,115 + BWI76_RS26775 0.25 -3.0 5,550,227 - BWI76_RS26775 0.35 +1.3 5,550,407 - BWI76_RS26775 0.51 -1.7 5,550,585 - BWI76_RS26775 0.67 -0.0 5,550,594 + BWI76_RS26775 0.68 -0.3 5,550,627 - BWI76_RS26775 0.71 -0.7 5,550,637 - BWI76_RS26775 0.72 -1.9 5,550,639 - BWI76_RS26775 0.72 -1.2 5,550,726 + BWI76_RS26775 0.80 +0.8 5,550,763 + BWI76_RS26775 0.83 -2.2 5,550,768 + BWI76_RS26775 0.83 -1.0 5,550,887 + -2.6 5,551,134 + +0.0 5,551,540 - BWI76_RS26780 0.25 -1.8 5,551,766 + BWI76_RS26780 0.35 +0.6 5,551,771 + BWI76_RS26780 0.35 +0.3 5,551,771 + BWI76_RS26780 0.35 +0.0 5,551,779 - BWI76_RS26780 0.35 +0.9 5,551,779 - BWI76_RS26780 0.35 +0.9 5,551,790 + BWI76_RS26780 0.36 -0.3 5,551,790 + BWI76_RS26780 0.36 +0.4 5,551,798 - BWI76_RS26780 0.36 -1.4 5,551,940 + BWI76_RS26780 0.42 +0.2
Or see this region's nucleotide sequence