Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22465 and BWI76_RS22470 overlap by 1 nucleotides BWI76_RS22470 and BWI76_RS22475 overlap by 8 nucleotides BWI76_RS22475 and BWI76_RS22480 are separated by 96 nucleotides
BWI76_RS22465: BWI76_RS22465 - hemin ABC transporter substrate-binding protein, at 4,684,110 to 4,684,928
_RS22465
BWI76_RS22470: BWI76_RS22470 - transporter permease, at 4,684,928 to 4,685,923
_RS22470
BWI76_RS22475: BWI76_RS22475 - heme ABC transporter ATP-binding protein, at 4,685,916 to 4,686,695
_RS22475
BWI76_RS22480: BWI76_RS22480 - lactaldehyde reductase, at 4,686,792 to 4,687,943
_RS22480
Position (kb)
4685
4686
4687 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4685.003 kb on - strand at 4685.172 kb on - strand, within BWI76_RS22470 at 4685.404 kb on + strand, within BWI76_RS22470 at 4685.513 kb on + strand, within BWI76_RS22470 at 4685.798 kb on + strand, within BWI76_RS22470 at 4686.110 kb on - strand, within BWI76_RS22475 at 4686.228 kb on + strand, within BWI76_RS22475 at 4686.468 kb on + strand, within BWI76_RS22475 at 4686.530 kb on + strand, within BWI76_RS22475 at 4686.576 kb on + strand, within BWI76_RS22475 at 4686.638 kb on + strand at 4686.654 kb on + strand at 4686.682 kb on + strand at 4686.685 kb on - strand at 4686.690 kb on - strand at 4687.067 kb on - strand, within BWI76_RS22480 at 4687.102 kb on + strand, within BWI76_RS22480 at 4687.102 kb on + strand, within BWI76_RS22480 at 4687.148 kb on + strand, within BWI76_RS22480 at 4687.175 kb on - strand, within BWI76_RS22480 at 4687.214 kb on + strand, within BWI76_RS22480 at 4687.318 kb on - strand, within BWI76_RS22480 at 4687.350 kb on + strand, within BWI76_RS22480 at 4687.478 kb on - strand, within BWI76_RS22480 at 4687.583 kb on - strand, within BWI76_RS22480 at 4687.631 kb on + strand, within BWI76_RS22480 at 4687.631 kb on + strand, within BWI76_RS22480 at 4687.639 kb on - strand, within BWI76_RS22480 at 4687.639 kb on - strand, within BWI76_RS22480 at 4687.641 kb on + strand, within BWI76_RS22480 at 4687.644 kb on - strand, within BWI76_RS22480 at 4687.654 kb on - strand, within BWI76_RS22480 at 4687.691 kb on + strand, within BWI76_RS22480 at 4687.691 kb on + strand, within BWI76_RS22480 at 4687.691 kb on + strand, within BWI76_RS22480
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 4,685,003 - +0.2 4,685,172 - BWI76_RS22470 0.24 -0.2 4,685,404 + BWI76_RS22470 0.48 -0.1 4,685,513 + BWI76_RS22470 0.59 +0.1 4,685,798 + BWI76_RS22470 0.87 +0.4 4,686,110 - BWI76_RS22475 0.25 -1.7 4,686,228 + BWI76_RS22475 0.40 -1.3 4,686,468 + BWI76_RS22475 0.71 -2.2 4,686,530 + BWI76_RS22475 0.79 -2.7 4,686,576 + BWI76_RS22475 0.85 +0.5 4,686,638 + -0.4 4,686,654 + +0.5 4,686,682 + -0.9 4,686,685 - +0.6 4,686,690 - +0.1 4,687,067 - BWI76_RS22480 0.24 +3.5 4,687,102 + BWI76_RS22480 0.27 +0.0 4,687,102 + BWI76_RS22480 0.27 -1.4 4,687,148 + BWI76_RS22480 0.31 +0.1 4,687,175 - BWI76_RS22480 0.33 -0.3 4,687,214 + BWI76_RS22480 0.37 -0.7 4,687,318 - BWI76_RS22480 0.46 -0.1 4,687,350 + BWI76_RS22480 0.48 -1.9 4,687,478 - BWI76_RS22480 0.60 +0.7 4,687,583 - BWI76_RS22480 0.69 -0.7 4,687,631 + BWI76_RS22480 0.73 +0.2 4,687,631 + BWI76_RS22480 0.73 -1.6 4,687,639 - BWI76_RS22480 0.74 +0.6 4,687,639 - BWI76_RS22480 0.74 -1.7 4,687,641 + BWI76_RS22480 0.74 +0.3 4,687,644 - BWI76_RS22480 0.74 -0.4 4,687,654 - BWI76_RS22480 0.75 +0.1 4,687,691 + BWI76_RS22480 0.78 -0.8 4,687,691 + BWI76_RS22480 0.78 +0.7 4,687,691 + BWI76_RS22480 0.78 +0.8
Or see this region's nucleotide sequence