Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21655 and BWI76_RS21660 are separated by 78 nucleotides BWI76_RS21660 and BWI76_RS21665 are separated by 10 nucleotides BWI76_RS21665 and BWI76_RS21670 overlap by 4 nucleotides BWI76_RS21670 and BWI76_RS21675 are separated by 13 nucleotides BWI76_RS21675 and BWI76_RS21680 are separated by 22 nucleotides
BWI76_RS21655: BWI76_RS21655 - hypothetical protein, at 4,533,282 to 4,534,103
_RS21655
BWI76_RS21660: BWI76_RS21660 - antirestriction protein, at 4,534,182 to 4,534,655
_RS21660
BWI76_RS21665: BWI76_RS21665 - hypothetical protein, at 4,534,666 to 4,534,899
_RS21665
BWI76_RS21670: BWI76_RS21670 - hypothetical protein, at 4,534,896 to 4,535,378
_RS21670
BWI76_RS21675: BWI76_RS21675 - hypothetical protein, at 4,535,392 to 4,535,613
_RS21675
BWI76_RS21680: BWI76_RS21680 - antitoxin of the YeeV-YeeU toxin-antitoxin system, at 4,535,636 to 4,535,995
_RS21680
Position (kb) 4534
4535 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4533.427 kb on + strand, within BWI76_RS21655 at 4533.427 kb on + strand, within BWI76_RS21655 at 4533.427 kb on + strand, within BWI76_RS21655 at 4533.454 kb on - strand, within BWI76_RS21655 at 4533.517 kb on + strand, within BWI76_RS21655 at 4533.523 kb on + strand, within BWI76_RS21655 at 4533.827 kb on + strand, within BWI76_RS21655 at 4533.827 kb on + strand, within BWI76_RS21655 at 4533.835 kb on - strand, within BWI76_RS21655 at 4533.927 kb on - strand, within BWI76_RS21655 at 4533.995 kb on + strand, within BWI76_RS21655 at 4533.995 kb on + strand, within BWI76_RS21655 at 4533.995 kb on + strand, within BWI76_RS21655 at 4534.003 kb on - strand, within BWI76_RS21655 at 4534.003 kb on - strand at 4534.387 kb on - strand, within BWI76_RS21660 at 4534.619 kb on + strand at 4534.882 kb on - strand at 4534.942 kb on + strand at 4534.963 kb on - strand, within BWI76_RS21670 at 4535.460 kb on + strand, within BWI76_RS21675 at 4535.587 kb on + strand, within BWI76_RS21675 at 4535.602 kb on + strand at 4535.605 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 4,533,427 + BWI76_RS21655 0.18 -0.4 4,533,427 + BWI76_RS21655 0.18 +2.2 4,533,427 + BWI76_RS21655 0.18 -0.0 4,533,454 - BWI76_RS21655 0.21 +0.6 4,533,517 + BWI76_RS21655 0.29 -0.7 4,533,523 + BWI76_RS21655 0.29 -1.9 4,533,827 + BWI76_RS21655 0.66 -0.3 4,533,827 + BWI76_RS21655 0.66 -0.1 4,533,835 - BWI76_RS21655 0.67 +0.2 4,533,927 - BWI76_RS21655 0.78 +0.5 4,533,995 + BWI76_RS21655 0.87 -0.4 4,533,995 + BWI76_RS21655 0.87 +0.5 4,533,995 + BWI76_RS21655 0.87 +0.3 4,534,003 - BWI76_RS21655 0.88 +1.0 4,534,003 - +0.2 4,534,387 - BWI76_RS21660 0.43 -1.9 4,534,619 + +0.5 4,534,882 - +0.7 4,534,942 + -1.0 4,534,963 - BWI76_RS21670 0.14 -2.0 4,535,460 + BWI76_RS21675 0.31 +0.5 4,535,587 + BWI76_RS21675 0.88 -0.4 4,535,602 + +0.1 4,535,605 - -0.8
Or see this region's nucleotide sequence