Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19690 and BWI76_RS19695 are separated by 173 nucleotides BWI76_RS19695 and BWI76_RS19700 are separated by 95 nucleotides BWI76_RS19700 and BWI76_RS19705 are separated by 1 nucleotides
BWI76_RS19690: BWI76_RS19690 - LysR family transcriptional regulator, at 4,115,262 to 4,116,128
_RS19690
BWI76_RS19695: BWI76_RS19695 - membrane protein, at 4,116,302 to 4,117,351
_RS19695
BWI76_RS19700: BWI76_RS19700 - deoxyribonuclease IV, at 4,117,447 to 4,118,304
_RS19700
BWI76_RS19705: BWI76_RS19705 - kinase, at 4,118,306 to 4,119,394
_RS19705
Position (kb) 4116
4117
4118 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4115.558 kb on - strand, within BWI76_RS19690 at 4116.025 kb on - strand, within BWI76_RS19690 at 4116.174 kb on - strand at 4117.220 kb on + strand, within BWI76_RS19695 at 4118.021 kb on + strand, within BWI76_RS19700 at 4118.029 kb on - strand, within BWI76_RS19700 at 4118.087 kb on + strand, within BWI76_RS19700 at 4118.324 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 4,115,558 - BWI76_RS19690 0.34 +2.1 4,116,025 - BWI76_RS19690 0.88 -0.9 4,116,174 - -0.2 4,117,220 + BWI76_RS19695 0.87 +0.7 4,118,021 + BWI76_RS19700 0.67 +0.8 4,118,029 - BWI76_RS19700 0.68 +1.1 4,118,087 + BWI76_RS19700 0.75 +0.6 4,118,324 - -1.9
Or see this region's nucleotide sequence