Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19440 and BWI76_RS19445 are separated by 10 nucleotides BWI76_RS19445 and BWI76_RS19450 overlap by 1 nucleotides
BWI76_RS19440: BWI76_RS19440 - putative transporter subunit, at 4,061,115 to 4,062,203
_RS19440
BWI76_RS19445: BWI76_RS19445 - hypothetical protein, at 4,062,214 to 4,064,499
_RS19445
BWI76_RS19450: BWI76_RS19450 - hypothetical protein, at 4,064,499 to 4,065,635
_RS19450
Position (kb)
4062
4063
4064
4065 Strain fitness (log2 ratio)
-1
0
1 at 4061.256 kb on - strand, within BWI76_RS19440 at 4061.405 kb on - strand, within BWI76_RS19440 at 4061.551 kb on - strand, within BWI76_RS19440 at 4061.682 kb on + strand, within BWI76_RS19440 at 4061.860 kb on + strand, within BWI76_RS19440 at 4062.257 kb on - strand at 4062.261 kb on - strand at 4062.261 kb on - strand at 4062.263 kb on + strand at 4062.383 kb on - strand at 4062.497 kb on - strand, within BWI76_RS19445 at 4062.525 kb on + strand, within BWI76_RS19445 at 4062.582 kb on + strand, within BWI76_RS19445 at 4062.601 kb on - strand, within BWI76_RS19445 at 4062.732 kb on - strand, within BWI76_RS19445 at 4062.999 kb on + strand, within BWI76_RS19445 at 4063.156 kb on - strand, within BWI76_RS19445 at 4063.377 kb on + strand, within BWI76_RS19445 at 4063.553 kb on + strand, within BWI76_RS19445 at 4064.182 kb on + strand, within BWI76_RS19445 at 4064.352 kb on - strand at 4064.535 kb on + strand at 4064.535 kb on - strand at 4064.587 kb on + strand at 4064.653 kb on + strand, within BWI76_RS19450 at 4064.725 kb on + strand, within BWI76_RS19450 at 4064.867 kb on - strand, within BWI76_RS19450 at 4065.057 kb on + strand, within BWI76_RS19450 at 4065.162 kb on + strand, within BWI76_RS19450
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 4,061,256 - BWI76_RS19440 0.13 +0.2 4,061,405 - BWI76_RS19440 0.27 -0.3 4,061,551 - BWI76_RS19440 0.40 +1.3 4,061,682 + BWI76_RS19440 0.52 -0.3 4,061,860 + BWI76_RS19440 0.68 +0.7 4,062,257 - -1.2 4,062,261 - +0.1 4,062,261 - +0.8 4,062,263 + -0.3 4,062,383 - -1.6 4,062,497 - BWI76_RS19445 0.12 +0.5 4,062,525 + BWI76_RS19445 0.14 +1.2 4,062,582 + BWI76_RS19445 0.16 +0.6 4,062,601 - BWI76_RS19445 0.17 +0.4 4,062,732 - BWI76_RS19445 0.23 -1.2 4,062,999 + BWI76_RS19445 0.34 +1.6 4,063,156 - BWI76_RS19445 0.41 +0.2 4,063,377 + BWI76_RS19445 0.51 +0.7 4,063,553 + BWI76_RS19445 0.59 +0.6 4,064,182 + BWI76_RS19445 0.86 +1.0 4,064,352 - +0.5 4,064,535 + +0.4 4,064,535 - +0.6 4,064,587 + -0.8 4,064,653 + BWI76_RS19450 0.14 -0.4 4,064,725 + BWI76_RS19450 0.20 +0.3 4,064,867 - BWI76_RS19450 0.32 +0.9 4,065,057 + BWI76_RS19450 0.49 +0.2 4,065,162 + BWI76_RS19450 0.58 +0.2
Or see this region's nucleotide sequence