Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15815 and BWI76_RS15820 are separated by 322 nucleotides BWI76_RS15820 and BWI76_RS15825 are separated by 427 nucleotides BWI76_RS15825 and BWI76_RS15830 are separated by 88 nucleotides
BWI76_RS15815: BWI76_RS15815 - hypothetical protein, at 3,288,778 to 3,289,425
_RS15815
BWI76_RS15820: BWI76_RS15820 - hypothetical protein, at 3,289,748 to 3,289,951
_RS15820
BWI76_RS15825: BWI76_RS15825 - hypothetical protein, at 3,290,379 to 3,290,573
_RS15825
BWI76_RS15830: BWI76_RS15830 - hypothetical protein, at 3,290,662 to 3,291,666
_RS15830
Position (kb)
3290
3291 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3289.392 kb on - strand at 3289.664 kb on + strand at 3289.672 kb on - strand at 3289.753 kb on - strand at 3290.312 kb on + strand at 3290.455 kb on + strand, within BWI76_RS15825 at 3290.553 kb on + strand, within BWI76_RS15825 at 3290.576 kb on + strand at 3290.743 kb on + strand at 3290.827 kb on + strand, within BWI76_RS15830 at 3290.862 kb on - strand, within BWI76_RS15830 at 3290.869 kb on + strand, within BWI76_RS15830 at 3290.869 kb on + strand, within BWI76_RS15830 at 3290.877 kb on - strand, within BWI76_RS15830 at 3290.889 kb on + strand, within BWI76_RS15830 at 3291.006 kb on + strand, within BWI76_RS15830 at 3291.068 kb on - strand, within BWI76_RS15830 at 3291.241 kb on + strand, within BWI76_RS15830 at 3291.274 kb on - strand, within BWI76_RS15830 at 3291.377 kb on - strand, within BWI76_RS15830 at 3291.400 kb on + strand, within BWI76_RS15830 at 3291.535 kb on - strand, within BWI76_RS15830 at 3291.559 kb on - strand, within BWI76_RS15830 at 3291.559 kb on - strand, within BWI76_RS15830
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 3,289,392 - -2.0 3,289,664 + -1.4 3,289,672 - -0.7 3,289,753 - -0.9 3,290,312 + -1.7 3,290,455 + BWI76_RS15825 0.39 +0.6 3,290,553 + BWI76_RS15825 0.89 -3.3 3,290,576 + -0.8 3,290,743 + -2.3 3,290,827 + BWI76_RS15830 0.16 -4.6 3,290,862 - BWI76_RS15830 0.20 -0.7 3,290,869 + BWI76_RS15830 0.21 -4.3 3,290,869 + BWI76_RS15830 0.21 -2.3 3,290,877 - BWI76_RS15830 0.21 -1.1 3,290,889 + BWI76_RS15830 0.23 -2.2 3,291,006 + BWI76_RS15830 0.34 -1.6 3,291,068 - BWI76_RS15830 0.40 +0.1 3,291,241 + BWI76_RS15830 0.58 -3.9 3,291,274 - BWI76_RS15830 0.61 -0.7 3,291,377 - BWI76_RS15830 0.71 +0.1 3,291,400 + BWI76_RS15830 0.73 +1.2 3,291,535 - BWI76_RS15830 0.87 -1.4 3,291,559 - BWI76_RS15830 0.89 -0.7 3,291,559 - BWI76_RS15830 0.89 -0.6
Or see this region's nucleotide sequence