Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15745 and BWI76_RS15750 overlap by 4 nucleotides BWI76_RS15750 and BWI76_RS15755 are separated by 20 nucleotides BWI76_RS15755 and BWI76_RS15760 overlap by 4 nucleotides BWI76_RS15760 and BWI76_RS15765 overlap by 17 nucleotides BWI76_RS15765 and BWI76_RS15770 overlap by 4 nucleotides
BWI76_RS15745: BWI76_RS15745 - hypothetical protein, at 3,281,382 to 3,282,116
_RS15745
BWI76_RS15750: BWI76_RS15750 - hypothetical protein, at 3,282,113 to 3,282,430
_RS15750
BWI76_RS15755: BWI76_RS15755 - hypothetical protein, at 3,282,451 to 3,282,711
_RS15755
BWI76_RS15760: BWI76_RS15760 - hypothetical protein, at 3,282,708 to 3,282,899
_RS15760
BWI76_RS15765: BWI76_RS15765 - hypothetical protein, at 3,282,883 to 3,283,599
_RS15765
BWI76_RS15770: BWI76_RS15770 - hypothetical protein, at 3,283,596 to 3,283,901
_RS15770
BWI76_RS15775: BWI76_RS15775 - replication protein, at 3,283,898 to 3,284,224
_RS15775
Position (kb) 3282
3283 Strain fitness (log2 ratio) -2
-1
0
1 at 3281.917 kb on + strand, within BWI76_RS15745 at 3281.925 kb on - strand, within BWI76_RS15745 at 3282.080 kb on + strand at 3282.127 kb on + strand at 3282.163 kb on + strand, within BWI76_RS15750 at 3282.548 kb on - strand, within BWI76_RS15755 at 3282.604 kb on - strand, within BWI76_RS15755 at 3282.604 kb on - strand, within BWI76_RS15755 at 3282.604 kb on - strand, within BWI76_RS15755 at 3282.604 kb on - strand, within BWI76_RS15755 at 3282.606 kb on - strand, within BWI76_RS15755 at 3282.654 kb on + strand, within BWI76_RS15755 at 3282.687 kb on + strand at 3282.729 kb on - strand, within BWI76_RS15760 at 3282.890 kb on + strand at 3282.928 kb on - strand at 3283.036 kb on - strand, within BWI76_RS15765 at 3283.144 kb on + strand, within BWI76_RS15765 at 3283.201 kb on - strand, within BWI76_RS15765 at 3283.292 kb on + strand, within BWI76_RS15765 at 3283.733 kb on - strand, within BWI76_RS15770 at 3283.740 kb on - strand, within BWI76_RS15770 at 3283.773 kb on - strand, within BWI76_RS15770 at 3283.804 kb on - strand, within BWI76_RS15770
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 3,281,917 + BWI76_RS15745 0.73 -1.6 3,281,925 - BWI76_RS15745 0.74 -0.4 3,282,080 + -0.9 3,282,127 + -1.6 3,282,163 + BWI76_RS15750 0.16 -0.5 3,282,548 - BWI76_RS15755 0.37 +0.4 3,282,604 - BWI76_RS15755 0.59 -0.6 3,282,604 - BWI76_RS15755 0.59 +0.6 3,282,604 - BWI76_RS15755 0.59 +0.1 3,282,604 - BWI76_RS15755 0.59 +0.1 3,282,606 - BWI76_RS15755 0.59 -0.4 3,282,654 + BWI76_RS15755 0.78 -1.7 3,282,687 + -0.7 3,282,729 - BWI76_RS15760 0.11 -1.3 3,282,890 + -0.1 3,282,928 - -0.8 3,283,036 - BWI76_RS15765 0.21 -0.6 3,283,144 + BWI76_RS15765 0.36 -0.1 3,283,201 - BWI76_RS15765 0.44 -0.4 3,283,292 + BWI76_RS15765 0.57 -0.3 3,283,733 - BWI76_RS15770 0.45 -2.4 3,283,740 - BWI76_RS15770 0.47 -0.2 3,283,773 - BWI76_RS15770 0.58 +0.3 3,283,804 - BWI76_RS15770 0.68 -0.1
Or see this region's nucleotide sequence