Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15655 and BWI76_RS15660 overlap by 14 nucleotides BWI76_RS15660 and BWI76_RS15665 are separated by 31 nucleotides BWI76_RS15665 and BWI76_RS15670 are separated by 274 nucleotides
BWI76_RS15655: BWI76_RS15655 - hypothetical protein, at 3,271,852 to 3,273,330
_RS15655
BWI76_RS15660: BWI76_RS15660 - hypothetical protein, at 3,273,317 to 3,273,796
_RS15660
BWI76_RS15665: BWI76_RS15665 - hypothetical protein, at 3,273,828 to 3,274,475
_RS15665
BWI76_RS15670: BWI76_RS15670 - hypothetical protein, at 3,274,750 to 3,274,950
_RS15670
Position (kb)
3273
3274 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3272.345 kb on - strand, within BWI76_RS15655 at 3272.599 kb on - strand, within BWI76_RS15655 at 3272.599 kb on - strand, within BWI76_RS15655 at 3272.633 kb on - strand, within BWI76_RS15655 at 3272.936 kb on + strand, within BWI76_RS15655 at 3272.993 kb on + strand, within BWI76_RS15655 at 3273.020 kb on - strand, within BWI76_RS15655 at 3273.088 kb on + strand, within BWI76_RS15655 at 3273.123 kb on + strand, within BWI76_RS15655 at 3273.196 kb on + strand at 3273.209 kb on - strand at 3273.415 kb on + strand, within BWI76_RS15660 at 3273.809 kb on + strand at 3273.817 kb on - strand at 3273.817 kb on - strand at 3273.867 kb on - strand at 3273.918 kb on - strand, within BWI76_RS15665 at 3274.043 kb on - strand, within BWI76_RS15665 at 3274.069 kb on + strand, within BWI76_RS15665 at 3274.327 kb on + strand, within BWI76_RS15665 at 3274.458 kb on + strand at 3274.487 kb on - strand at 3274.489 kb on - strand at 3274.494 kb on - strand at 3274.621 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 3,272,345 - BWI76_RS15655 0.33 +0.1 3,272,599 - BWI76_RS15655 0.51 -3.5 3,272,599 - BWI76_RS15655 0.51 -0.4 3,272,633 - BWI76_RS15655 0.53 +0.7 3,272,936 + BWI76_RS15655 0.73 +0.6 3,272,993 + BWI76_RS15655 0.77 -1.9 3,273,020 - BWI76_RS15655 0.79 -0.5 3,273,088 + BWI76_RS15655 0.84 +0.7 3,273,123 + BWI76_RS15655 0.86 -1.5 3,273,196 + -1.6 3,273,209 - -0.1 3,273,415 + BWI76_RS15660 0.20 -1.9 3,273,809 + -0.8 3,273,817 - -1.9 3,273,817 - -3.1 3,273,867 - -1.6 3,273,918 - BWI76_RS15665 0.14 -0.1 3,274,043 - BWI76_RS15665 0.33 -0.3 3,274,069 + BWI76_RS15665 0.37 +0.9 3,274,327 + BWI76_RS15665 0.77 +0.1 3,274,458 + +0.8 3,274,487 - -0.2 3,274,489 - -2.3 3,274,494 - -2.1 3,274,621 + +0.1
Or see this region's nucleotide sequence