Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08715

Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
1,834,093	+		BWI76_RS08705	0.45	-1.7
1,834,093	+		BWI76_RS08705	0.45	+1.1
1,834,093	+		BWI76_RS08705	0.45	+0.3
1,834,098	+		BWI76_RS08705	0.46	-2.1
1,834,175	+		BWI76_RS08705	0.59	-1.1
1,834,209	-		BWI76_RS08705	0.66	+1.1
1,834,223	-		BWI76_RS08705	0.68	-0.4
1,834,223	-		BWI76_RS08705	0.68	+1.1
1,834,253	-		BWI76_RS08705	0.74	-0.4
1,834,319	+		BWI76_RS08705	0.85	-0.0
1,834,327	-		BWI76_RS08705	0.87	-1.9
1,834,405	-				+0.1
1,834,407	-				-1.0
1,834,468	+				-1.0
1,834,558	-		BWI76_RS08710	0.46	-2.0
1,834,570	+				+0.1
1,834,572	+		BWI76_RS08710	0.52	+0.4
1,834,579	+		BWI76_RS08710	0.55	+1.3
1,834,579	+		BWI76_RS08710	0.55	-0.4
1,834,579	+		BWI76_RS08710	0.55	+1.1
1,834,579	+		BWI76_RS08710	0.55	-1.7
1,834,579	+		BWI76_RS08710	0.55	+0.4
1,834,579	+		BWI76_RS08710	0.55	-0.6
1,834,579	+		BWI76_RS08710	0.55	-0.9
1,834,579	+		BWI76_RS08710	0.55	-1.2
1,834,579	+		BWI76_RS08710	0.55	+0.1
1,834,579	+		BWI76_RS08710	0.55	-1.0
1,834,580	-		BWI76_RS08710	0.56	+4.1
1,834,585	-		BWI76_RS08710	0.58	-1.3
1,834,587	-		BWI76_RS08710	0.59	-0.7
1,834,587	-		BWI76_RS08710	0.59	+1.1
1,834,587	-		BWI76_RS08710	0.59	-1.4
1,834,587	-		BWI76_RS08710	0.59	-2.8
1,834,587	-		BWI76_RS08710	0.59	-1.9
1,834,587	-		BWI76_RS08710	0.59	+0.3
1,834,587	-		BWI76_RS08710	0.59	+0.2
1,834,587	-		BWI76_RS08710	0.59	+0.3
1,834,587	-		BWI76_RS08710	0.59	+1.1
1,834,587	-		BWI76_RS08710	0.59	-1.3
1,834,587	-		BWI76_RS08710	0.59	-0.4
1,834,587	-		BWI76_RS08710	0.59	+0.7
1,834,591	+		BWI76_RS08710	0.61	-1.2
1,834,591	+		BWI76_RS08710	0.61	+0.1
1,834,591	+		BWI76_RS08710	0.61	-0.1
1,834,593	-		BWI76_RS08710	0.62	+0.4
1,834,597	-		BWI76_RS08710	0.63	+0.7
1,834,597	-		BWI76_RS08710	0.63	+0.1
1,834,599	-		BWI76_RS08710	0.64	-0.4
1,834,599	-		BWI76_RS08710	0.64	-1.2
1,834,599	-		BWI76_RS08710	0.64	-0.3
1,834,604	-		BWI76_RS08710	0.67	-1.3
1,834,678	+				-1.2
1,834,729	+				+1.1
1,834,729	+				-1.1
1,834,729	+				+1.5
1,834,729	+				-0.1
1,834,729	+				+1.0
1,834,729	+				-1.4
1,834,729	+				-0.6
1,834,729	+				-1.9
1,834,729	+				-1.4
1,834,729	+				+1.5
1,834,737	-				-1.7
1,834,737	-				-3.1
1,834,737	-				+0.8
1,834,737	-				-1.5
1,834,737	-				-1.2
1,834,737	-				-0.9
1,834,737	-				+0.1
1,834,742	+				-0.8
1,834,749	+				-0.6
1,834,749	+				+1.1
1,834,749	+				-3.1
1,834,749	+				-2.3
1,834,757	-				-1.9
1,834,757	-				-0.0
1,834,757	-				+0.9
1,834,757	-				+1.6
1,834,758	-				+0.1
1,834,760	+				+1.5
1,834,766	+				+0.1
1,834,870	+				-1.3
1,834,905	+				-0.4
1,835,010	+				-1.1
1,835,010	+				+0.2
1,835,017	+				+1.0
1,835,022	+				+0.3
1,835,041	+				+0.7
1,835,049	-				+1.1
1,835,076	-				-0.9
1,835,083	-				+1.1
1,835,259	-		BWI76_RS08715	0.13	+1.2
1,835,260	-		BWI76_RS08715	0.13	+0.8
1,835,401	+		BWI76_RS08715	0.24	+0.4
1,835,414	+		BWI76_RS08715	0.25	-0.7
1,835,416	+		BWI76_RS08715	0.25	-0.2
1,835,445	-		BWI76_RS08715	0.27	-0.2
1,835,496	+		BWI76_RS08715	0.31	+1.0
1,835,504	-		BWI76_RS08715	0.32	-0.0
1,835,554	-		BWI76_RS08715	0.36	+0.3
1,835,564	-		BWI76_RS08715	0.37	-0.2
1,835,564	-		BWI76_RS08715	0.37	+0.8
1,835,711	-		BWI76_RS08715	0.48	-0.5
1,835,788	+		BWI76_RS08715	0.54	+0.1
1,836,021	+		BWI76_RS08715	0.72	-3.1
1,836,029	-		BWI76_RS08715	0.73	+0.4
1,836,096	+		BWI76_RS08715	0.78	+0.6
1,836,330	-				-2.9
1,836,334	+				-0.5
1,836,434	-				+0.1
1,836,585	+				+0.6
1,836,688	-				+0.5
1,836,688	-				-1.6
1,837,299	+		BWI76_RS08720	0.57	-1.7