Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07260 and BWI76_RS07265 are separated by 27 nucleotides BWI76_RS07265 and BWI76_RS07270 overlap by 8 nucleotides BWI76_RS07270 and BWI76_RS07275 overlap by 4 nucleotides
BWI76_RS07260: BWI76_RS07260 - branched chain amino acid ABC transporter substrate-binding protein, at 1,527,758 to 1,528,915
_RS07260
BWI76_RS07265: BWI76_RS07265 - ABC transporter ATP-binding protein, at 1,528,943 to 1,529,662
_RS07265
BWI76_RS07270: BWI76_RS07270 - ABC transporter ATP-binding protein, at 1,529,655 to 1,530,422
_RS07270
BWI76_RS07275: BWI76_RS07275 - ABC transporter, at 1,530,419 to 1,531,525
_RS07275
Position (kb)
1529
1530
1531 Strain fitness (log2 ratio)
-2
-1
0
1 at 1528.970 kb on - strand at 1529.017 kb on + strand, within BWI76_RS07265 at 1529.220 kb on - strand, within BWI76_RS07265 at 1529.433 kb on - strand, within BWI76_RS07265 at 1529.539 kb on - strand, within BWI76_RS07265 at 1529.596 kb on - strand at 1529.596 kb on - strand at 1529.890 kb on + strand, within BWI76_RS07270 at 1529.923 kb on - strand, within BWI76_RS07270 at 1530.281 kb on + strand, within BWI76_RS07270 at 1530.289 kb on - strand, within BWI76_RS07270 at 1530.341 kb on + strand, within BWI76_RS07270 at 1530.349 kb on - strand at 1530.447 kb on + strand at 1530.487 kb on + strand at 1530.599 kb on + strand, within BWI76_RS07275 at 1530.693 kb on - strand, within BWI76_RS07275 at 1530.693 kb on - strand, within BWI76_RS07275 at 1530.751 kb on - strand, within BWI76_RS07275 at 1530.770 kb on + strand, within BWI76_RS07275 at 1530.826 kb on - strand, within BWI76_RS07275 at 1531.116 kb on - strand, within BWI76_RS07275 at 1531.150 kb on - strand at 1531.195 kb on + strand, within BWI76_RS07275 at 1531.342 kb on + strand, within BWI76_RS07275 at 1531.371 kb on + strand, within BWI76_RS07275 at 1531.371 kb on + strand, within BWI76_RS07275 at 1531.371 kb on + strand, within BWI76_RS07275 at 1531.379 kb on - strand, within BWI76_RS07275
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 1,528,970 - -2.7 1,529,017 + BWI76_RS07265 0.10 -0.4 1,529,220 - BWI76_RS07265 0.38 -0.4 1,529,433 - BWI76_RS07265 0.68 -0.2 1,529,539 - BWI76_RS07265 0.83 +0.1 1,529,596 - +1.5 1,529,596 - -1.2 1,529,890 + BWI76_RS07270 0.31 +0.5 1,529,923 - BWI76_RS07270 0.35 +0.4 1,530,281 + BWI76_RS07270 0.82 +0.4 1,530,289 - BWI76_RS07270 0.83 +0.9 1,530,341 + BWI76_RS07270 0.89 +0.7 1,530,349 - +1.1 1,530,447 + +0.2 1,530,487 + +0.7 1,530,599 + BWI76_RS07275 0.16 +0.4 1,530,693 - BWI76_RS07275 0.25 -0.0 1,530,693 - BWI76_RS07275 0.25 +0.2 1,530,751 - BWI76_RS07275 0.30 -1.4 1,530,770 + BWI76_RS07275 0.32 -0.3 1,530,826 - BWI76_RS07275 0.37 -1.3 1,531,116 - BWI76_RS07275 0.63 +0.1 1,531,150 - +1.1 1,531,195 + BWI76_RS07275 0.70 +1.1 1,531,342 + BWI76_RS07275 0.83 +0.8 1,531,371 + BWI76_RS07275 0.86 -0.9 1,531,371 + BWI76_RS07275 0.86 +0.1 1,531,371 + BWI76_RS07275 0.86 +1.0 1,531,379 - BWI76_RS07275 0.87 +0.0
Or see this region's nucleotide sequence