Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03115 and BWI76_RS03120 are separated by 139 nucleotides BWI76_RS03120 and BWI76_RS03125 are separated by 5 nucleotides BWI76_RS03125 and BWI76_RS03130 are separated by 10 nucleotides
BWI76_RS03115: BWI76_RS03115 - ABC transporter substrate-binding protein, at 641,872 to 643,182
_RS03115
BWI76_RS03120: BWI76_RS03120 - ABC transporter ATP-binding protein, at 643,322 to 644,392
_RS03120
BWI76_RS03125: BWI76_RS03125 - phosphodiesterase, at 644,398 to 645,222
_RS03125
BWI76_RS03130: BWI76_RS03130 - putative SN-glycerol-3-phosphate transport system permease, at 645,233 to 646,120
_RS03130
Position (kb) 643
644
645 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 642.365 kb on + strand, within BWI76_RS03115 at 642.570 kb on - strand, within BWI76_RS03115 at 642.648 kb on + strand, within BWI76_RS03115 at 642.687 kb on - strand, within BWI76_RS03115 at 642.773 kb on - strand, within BWI76_RS03115 at 642.859 kb on - strand, within BWI76_RS03115 at 642.867 kb on - strand, within BWI76_RS03115 at 642.984 kb on + strand, within BWI76_RS03115 at 643.062 kb on - strand at 643.079 kb on - strand at 643.137 kb on + strand at 643.137 kb on + strand at 643.137 kb on + strand at 643.137 kb on + strand at 643.137 kb on + strand at 643.145 kb on - strand at 643.145 kb on - strand at 643.145 kb on - strand at 643.145 kb on - strand at 643.145 kb on - strand at 643.149 kb on + strand at 643.237 kb on + strand at 643.237 kb on + strand at 643.245 kb on - strand at 643.458 kb on - strand, within BWI76_RS03120 at 643.468 kb on - strand, within BWI76_RS03120 at 643.562 kb on + strand, within BWI76_RS03120 at 643.628 kb on + strand, within BWI76_RS03120 at 643.736 kb on + strand, within BWI76_RS03120 at 643.744 kb on - strand, within BWI76_RS03120 at 643.827 kb on - strand, within BWI76_RS03120 at 644.049 kb on + strand, within BWI76_RS03120 at 644.247 kb on - strand, within BWI76_RS03120 at 644.269 kb on - strand, within BWI76_RS03120 at 644.616 kb on + strand at 644.699 kb on - strand, within BWI76_RS03125 at 644.908 kb on - strand, within BWI76_RS03125 at 644.965 kb on - strand, within BWI76_RS03125 at 645.084 kb on + strand, within BWI76_RS03125 at 645.103 kb on + strand, within BWI76_RS03125 at 645.103 kb on + strand, within BWI76_RS03125 at 645.105 kb on + strand, within BWI76_RS03125
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 642,365 + BWI76_RS03115 0.38 +0.4 642,570 - BWI76_RS03115 0.53 -0.3 642,648 + BWI76_RS03115 0.59 +0.5 642,687 - BWI76_RS03115 0.62 -0.1 642,773 - BWI76_RS03115 0.69 -0.5 642,859 - BWI76_RS03115 0.75 +0.8 642,867 - BWI76_RS03115 0.76 -1.6 642,984 + BWI76_RS03115 0.85 -0.7 643,062 - -0.0 643,079 - -0.9 643,137 + +1.2 643,137 + -1.7 643,137 + +1.3 643,137 + -1.7 643,137 + +0.9 643,145 - +0.5 643,145 - -0.6 643,145 - -0.1 643,145 - -1.6 643,145 - +0.8 643,149 + -0.6 643,237 + +0.3 643,237 + +0.4 643,245 - -1.9 643,458 - BWI76_RS03120 0.13 +0.3 643,468 - BWI76_RS03120 0.14 +1.1 643,562 + BWI76_RS03120 0.22 +0.7 643,628 + BWI76_RS03120 0.29 +0.6 643,736 + BWI76_RS03120 0.39 +1.7 643,744 - BWI76_RS03120 0.39 +0.1 643,827 - BWI76_RS03120 0.47 -0.3 644,049 + BWI76_RS03120 0.68 +0.8 644,247 - BWI76_RS03120 0.86 +1.0 644,269 - BWI76_RS03120 0.88 +0.6 644,616 + +1.4 644,699 - BWI76_RS03125 0.36 +0.1 644,908 - BWI76_RS03125 0.62 -1.8 644,965 - BWI76_RS03125 0.69 +0.2 645,084 + BWI76_RS03125 0.83 +0.3 645,103 + BWI76_RS03125 0.85 +2.8 645,103 + BWI76_RS03125 0.85 -1.7 645,105 + BWI76_RS03125 0.86 +0.6
Or see this region's nucleotide sequence