Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01375 and BWI76_RS01380 overlap by 1 nucleotides BWI76_RS01380 and BWI76_RS01385 are separated by 41 nucleotides
BWI76_RS01375: BWI76_RS01375 - Xaa-Pro dipeptidase, at 281,018 to 282,349
_RS01375
BWI76_RS01380: BWI76_RS01380 - YigZ family protein, at 282,349 to 282,963
_RS01380
BWI76_RS01385: BWI76_RS01385 - potassium transporter, at 283,005 to 284,456
_RS01385
Position (kb) 282
283 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 281.457 kb on + strand, within BWI76_RS01375 at 281.508 kb on + strand, within BWI76_RS01375 at 281.656 kb on - strand, within BWI76_RS01375 at 281.686 kb on + strand, within BWI76_RS01375 at 281.698 kb on + strand, within BWI76_RS01375 at 281.711 kb on - strand, within BWI76_RS01375 at 281.737 kb on + strand, within BWI76_RS01375 at 281.869 kb on + strand, within BWI76_RS01375 at 281.869 kb on + strand, within BWI76_RS01375 at 281.869 kb on + strand, within BWI76_RS01375 at 281.869 kb on + strand, within BWI76_RS01375 at 281.877 kb on - strand, within BWI76_RS01375 at 281.902 kb on + strand, within BWI76_RS01375 at 281.959 kb on - strand, within BWI76_RS01375 at 282.032 kb on - strand, within BWI76_RS01375 at 282.032 kb on - strand, within BWI76_RS01375 at 282.076 kb on + strand, within BWI76_RS01375 at 282.095 kb on - strand, within BWI76_RS01375 at 282.095 kb on - strand, within BWI76_RS01375 at 282.099 kb on - strand, within BWI76_RS01375 at 282.100 kb on - strand, within BWI76_RS01375 at 282.220 kb on + strand at 282.230 kb on + strand at 282.479 kb on - strand, within BWI76_RS01380 at 282.591 kb on + strand, within BWI76_RS01380 at 282.719 kb on + strand, within BWI76_RS01380 at 282.720 kb on - strand, within BWI76_RS01380 at 283.237 kb on - strand, within BWI76_RS01385 at 283.264 kb on + strand, within BWI76_RS01385 at 283.908 kb on - strand, within BWI76_RS01385 at 283.931 kb on + strand, within BWI76_RS01385
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 281,457 + BWI76_RS01375 0.33 -2.3 281,508 + BWI76_RS01375 0.37 +0.6 281,656 - BWI76_RS01375 0.48 +0.6 281,686 + BWI76_RS01375 0.50 +0.5 281,698 + BWI76_RS01375 0.51 +1.8 281,711 - BWI76_RS01375 0.52 +1.4 281,737 + BWI76_RS01375 0.54 +0.4 281,869 + BWI76_RS01375 0.64 -0.9 281,869 + BWI76_RS01375 0.64 -0.2 281,869 + BWI76_RS01375 0.64 -0.0 281,869 + BWI76_RS01375 0.64 -0.0 281,877 - BWI76_RS01375 0.64 -0.0 281,902 + BWI76_RS01375 0.66 -0.4 281,959 - BWI76_RS01375 0.71 -2.1 282,032 - BWI76_RS01375 0.76 -0.2 282,032 - BWI76_RS01375 0.76 +0.3 282,076 + BWI76_RS01375 0.79 +1.8 282,095 - BWI76_RS01375 0.81 -0.9 282,095 - BWI76_RS01375 0.81 +1.0 282,099 - BWI76_RS01375 0.81 +0.9 282,100 - BWI76_RS01375 0.81 +0.4 282,220 + +2.7 282,230 + +3.2 282,479 - BWI76_RS01380 0.21 -2.7 282,591 + BWI76_RS01380 0.39 -2.7 282,719 + BWI76_RS01380 0.60 -0.1 282,720 - BWI76_RS01380 0.60 -0.9 283,237 - BWI76_RS01385 0.16 +0.4 283,264 + BWI76_RS01385 0.18 -1.2 283,908 - BWI76_RS01385 0.62 +2.0 283,931 + BWI76_RS01385 0.64 -2.2
Or see this region's nucleotide sequence