Strain Fitness in Sinorhizobium meliloti 1021 around SMc00759

Experiment: Mannobiose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc00740 and SMc00739 overlap by 1 nucleotidesSMc00739 and SMc00759 are separated by 61 nucleotidesSMc00759 and SMc00738 are separated by 318 nucleotidesSMc00738 and SMc00737 are separated by 31 nucleotides SMc00740: SMc00740 - hypothetical protein, at 2,842,713 to 2,842,997 SMc00740 SMc00739: SMc00739 - hypothetical protein, at 2,842,997 to 2,843,479 SMc00739 SMc00759: SMc00759 - tRNA-Leu, at 2,843,541 to 2,843,625 SMc00759 SMc00738: SMc00738 - hypothetical protein, at 2,843,944 to 2,844,453 SMc00738 SMc00737: SMc00737 - hypothetical protein, at 2,844,485 to 2,845,042 SMc00737 Position (kb) 2843 2844Strain fitness (log2 ratio) -2 -1 0 1 2at 2842.542 kb on + strandat 2842.543 kb on - strandat 2842.673 kb on + strandat 2842.682 kb on - strandat 2842.686 kb on + strandat 2842.687 kb on - strandat 2842.687 kb on - strandat 2842.687 kb on - strandat 2842.777 kb on + strand, within SMc00740at 2842.777 kb on + strand, within SMc00740at 2842.778 kb on - strand, within SMc00740at 2842.778 kb on - strand, within SMc00740at 2842.918 kb on - strand, within SMc00740at 2842.918 kb on - strand, within SMc00740at 2843.037 kb on + strandat 2843.126 kb on + strand, within SMc00739at 2843.126 kb on + strand, within SMc00739at 2843.126 kb on + strand, within SMc00739at 2843.126 kb on + strand, within SMc00739at 2843.126 kb on + strand, within SMc00739at 2843.126 kb on + strand, within SMc00739at 2843.127 kb on - strand, within SMc00739at 2843.127 kb on - strand, within SMc00739at 2843.132 kb on - strand, within SMc00739at 2843.162 kb on + strand, within SMc00739at 2843.163 kb on - strand, within SMc00739at 2843.163 kb on - strand, within SMc00739at 2843.264 kb on - strand, within SMc00739at 2843.770 kb on + strandat 2843.771 kb on - strandat 2843.850 kb on + strandat 2843.871 kb on + strandat 2843.871 kb on + strandat 2843.871 kb on + strandat 2844.451 kb on + strandat 2844.487 kb on - strandat 2844.516 kb on + strandat 2844.517 kb on - strandat 2844.566 kb on - strand, within SMc00737at 2844.594 kb on + strand, within SMc00737at 2844.595 kb on - strand, within SMc00737at 2844.597 kb on - strand, within SMc00737

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Per-strain Table

Position Strand Gene LocusTag Fraction Mannobiose (C)
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2,842,542 + -0.3
2,842,543 - -0.6
2,842,673 + -0.5
2,842,682 - +0.4
2,842,686 + -0.1
2,842,687 - -0.4
2,842,687 - -0.2
2,842,687 - -0.3
2,842,777 + SMc00740 0.22 +2.6
2,842,777 + SMc00740 0.22 -0.1
2,842,778 - SMc00740 0.23 -0.4
2,842,778 - SMc00740 0.23 +0.1
2,842,918 - SMc00740 0.72 -0.3
2,842,918 - SMc00740 0.72 -0.6
2,843,037 + +1.3
2,843,126 + SMc00739 0.27 +0.0
2,843,126 + SMc00739 0.27 -0.1
2,843,126 + SMc00739 0.27 -1.7
2,843,126 + SMc00739 0.27 +0.3
2,843,126 + SMc00739 0.27 -0.1
2,843,126 + SMc00739 0.27 -0.2
2,843,127 - SMc00739 0.27 +0.3
2,843,127 - SMc00739 0.27 -0.9
2,843,132 - SMc00739 0.28 +0.3
2,843,162 + SMc00739 0.34 -0.5
2,843,163 - SMc00739 0.34 +0.3
2,843,163 - SMc00739 0.34 -0.4
2,843,264 - SMc00739 0.55 +0.4
2,843,770 + -0.4
2,843,771 - -0.1
2,843,850 + -2.3
2,843,871 + -0.5
2,843,871 + -0.1
2,843,871 + -0.1
2,844,451 + +1.0
2,844,487 - +0.6
2,844,516 + +1.6
2,844,517 - +0.2
2,844,566 - SMc00737 0.15 -0.2
2,844,594 + SMc00737 0.20 -0.2
2,844,595 - SMc00737 0.20 -0.1
2,844,597 - SMc00737 0.20 -0.2

Or see this region's nucleotide sequence