Strain Fitness in Sinorhizobium meliloti 1021 around SMa0431

Experiment: Mannobiose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMa0429 and SMa0431 overlap by 8 nucleotidesSMa0431 and SMa0433 are separated by 530 nucleotides SMa0429: SMa0429 - hypothetical protein, at 231,427 to 232,443 SMa0429 SMa0431: SMa0431 - hypothetical protein, at 232,436 to 233,029 SMa0431 SMa0433: SMa0433 - hypothetical protein, at 233,560 to 234,030 SMa0433 Position (kb) 232 233 234Strain fitness (log2 ratio) -1 0 1at 231.448 kb on - strandat 231.448 kb on - strandat 231.543 kb on - strand, within SMa0429at 231.609 kb on - strand, within SMa0429at 231.995 kb on + strand, within SMa0429at 232.005 kb on - strandat 232.250 kb on + strand, within SMa0429at 232.250 kb on + strand, within SMa0429at 232.863 kb on + strand, within SMa0431at 233.176 kb on + strandat 233.184 kb on + strandat 233.218 kb on - strandat 233.342 kb on + strandat 233.414 kb on - strandat 233.414 kb on - strandat 233.419 kb on - strandat 233.603 kb on + strandat 233.604 kb on - strandat 233.698 kb on + strand, within SMa0433at 233.704 kb on - strand, within SMa0433

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Per-strain Table

Position Strand Gene LocusTag Fraction Mannobiose (C)
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231,448 - +0.1
231,448 - +0.1
231,543 - SMa0429 0.11 +0.1
231,609 - SMa0429 0.18 -0.2
231,995 + SMa0429 0.56 +0.3
232,005 - +0.9
232,250 + SMa0429 0.81 -1.1
232,250 + SMa0429 0.81 +0.2
232,863 + SMa0431 0.72 -0.4
233,176 + +0.2
233,184 + -0.2
233,218 - +0.4
233,342 + -0.3
233,414 - +0.3
233,414 - +0.0
233,419 - +0.2
233,603 + +0.7
233,604 - -0.0
233,698 + SMa0433 0.29 +0.4
233,704 - SMa0433 0.31 +0.3

Or see this region's nucleotide sequence