Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22580

Experiment: Glucose (C) and nitrate (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and nitrate (N); with MOPS
5,082,995	+				+0.0
5,082,995	+				-1.1
5,082,995	+				-1.6
5,082,995	+				-3.3
5,082,996	-				-1.1
5,082,996	-				-2.5
5,083,088	-				+0.7
5,083,088	-				-1.3
5,083,088	-				-1.1
5,083,308	-		PFLU_RS22575	0.41	-1.7
5,083,365	+		PFLU_RS22575	0.51	-1.4
5,083,365	+		PFLU_RS22575	0.51	-1.6
5,083,365	+		PFLU_RS22575	0.51	-2.9
5,083,365	+		PFLU_RS22575	0.51	-2.9
5,083,365	+		PFLU_RS22575	0.51	-0.6
5,083,365	+		PFLU_RS22575	0.51	-2.3
5,083,366	-		PFLU_RS22575	0.51	-1.8
5,083,366	-		PFLU_RS22575	0.51	-2.7
5,083,379	+		PFLU_RS22575	0.53	-0.3
5,083,379	+		PFLU_RS22575	0.53	-1.3
5,083,380	-		PFLU_RS22575	0.54	-0.9
5,083,554	+		PFLU_RS22575	0.84	-0.6
5,083,554	+		PFLU_RS22575	0.84	-0.3
5,083,554	+		PFLU_RS22575	0.84	+0.1
5,083,554	+		PFLU_RS22575	0.84	-2.8
5,083,555	-		PFLU_RS22575	0.84	-2.1
5,083,555	-		PFLU_RS22575	0.84	-3.9
5,083,555	-		PFLU_RS22575	0.84	-0.9
5,083,555	-		PFLU_RS22575	0.84	-3.3
5,083,555	-		PFLU_RS22575	0.84	-2.8
5,083,555	-		PFLU_RS22575	0.84	-1.1
5,083,555	-		PFLU_RS22575	0.84	-1.1
5,083,555	-		PFLU_RS22575	0.84	-2.2
5,083,555	-		PFLU_RS22575	0.84	-2.0
5,083,606	+				-2.6
5,083,664	+				-2.2
5,083,664	+				-0.7
5,083,665	-				-1.8
5,083,665	-				-0.4
5,083,665	-				-0.6
5,083,665	-				-1.7
5,083,665	-				-0.6
5,083,668	+				+0.5
5,083,668	+				-2.8
5,083,668	+				+0.0
5,083,668	+				-1.3
5,083,669	-				-1.8
5,083,669	-				-1.2
5,083,669	-				-1.3
5,083,669	-				-3.1
5,083,681	+				+0.1
5,083,682	-				-3.5
5,083,682	-				-1.1
5,083,827	+				-0.2
5,083,827	+				-2.7
5,083,827	+				+0.0
5,083,827	+				-0.1
5,083,827	+				-0.6
5,083,827	+				+1.5
5,083,827	+				+0.5
5,083,828	-				-2.9
5,083,828	-				-2.8
5,083,828	-				-2.8
5,083,828	-				-0.6
5,083,828	-				-3.0
5,083,828	-				-0.5
5,083,828	-				+0.1
5,083,828	-				+1.7
5,083,828	-				-1.1
5,083,828	-				-2.6
5,083,828	-				-0.1
5,083,828	-				-0.3
5,083,828	-				-1.3
5,083,828	-				-0.5
5,083,828	-				-2.7
5,083,913	+				-3.0
5,083,914	-				-1.2
5,083,914	-				-1.1
5,083,914	-				-0.5
5,083,940	+				-0.5
5,083,941	-				-0.3
5,083,941	-				-0.8
5,083,941	-				+0.7
5,084,112	+		PFLU_RS22580	0.21	+0.7
5,084,112	+		PFLU_RS22580	0.21	-0.5
5,084,112	+		PFLU_RS22580	0.21	-2.2
5,084,113	-		PFLU_RS22580	0.21	+0.0
5,084,113	-		PFLU_RS22580	0.21	-2.3
5,084,113	-		PFLU_RS22580	0.21	-3.4
5,084,113	-		PFLU_RS22580	0.21	-0.1
5,084,113	-		PFLU_RS22580	0.21	-2.2
5,084,159	+		PFLU_RS22580	0.25	-2.6
5,084,159	+		PFLU_RS22580	0.25	-1.1
5,084,160	-		PFLU_RS22580	0.25	-0.9
5,084,160	-		PFLU_RS22580	0.25	-3.2
5,084,160	-		PFLU_RS22580	0.25	-1.3
5,084,290	+		PFLU_RS22580	0.36	-1.2
5,084,290	+		PFLU_RS22580	0.36	+1.1
5,084,291	-		PFLU_RS22580	0.36	-0.4
5,084,459	+		PFLU_RS22580	0.50	-1.7
5,084,459	+		PFLU_RS22580	0.50	+0.1
5,084,460	-		PFLU_RS22580	0.50	-0.6
5,084,460	-		PFLU_RS22580	0.50	-1.1
5,084,460	-		PFLU_RS22580	0.50	-2.0
5,084,460	-		PFLU_RS22580	0.50	-1.9
5,084,460	-		PFLU_RS22580	0.50	-1.8
5,084,508	-		PFLU_RS22580	0.54	+1.0
5,084,508	-		PFLU_RS22580	0.54	-1.9
5,084,558	+		PFLU_RS22580	0.58	-0.8
5,084,573	+		PFLU_RS22580	0.59	-1.8
5,084,573	+		PFLU_RS22580	0.59	-1.2
5,084,574	-		PFLU_RS22580	0.59	-1.2
5,084,600	+		PFLU_RS22580	0.61	-2.1
5,084,601	-		PFLU_RS22580	0.61	-2.5
5,084,603	+		PFLU_RS22580	0.62	-1.5
5,084,603	+		PFLU_RS22580	0.62	-2.5
5,084,603	+		PFLU_RS22580	0.62	-2.3
5,084,603	+		PFLU_RS22580	0.62	-2.2
5,084,603	+		PFLU_RS22580	0.62	-0.8
5,084,603	+		PFLU_RS22580	0.62	-1.5
5,084,603	+		PFLU_RS22580	0.62	-1.6
5,084,604	-		PFLU_RS22580	0.62	-1.5
5,084,604	-		PFLU_RS22580	0.62	-1.3
5,084,604	-		PFLU_RS22580	0.62	-3.4
5,084,604	-		PFLU_RS22580	0.62	-0.8
5,084,604	-		PFLU_RS22580	0.62	-1.3
5,084,604	-		PFLU_RS22580	0.62	-1.0
5,084,604	-		PFLU_RS22580	0.62	-0.9
5,084,699	+		PFLU_RS22580	0.70	-2.1
5,084,699	+		PFLU_RS22580	0.70	-2.0
5,084,699	+		PFLU_RS22580	0.70	-0.2
5,084,699	+		PFLU_RS22580	0.70	-0.5
5,084,699	+		PFLU_RS22580	0.70	-2.2
5,084,699	+		PFLU_RS22580	0.70	-1.1
5,084,699	+		PFLU_RS22580	0.70	-0.4
5,084,699	+		PFLU_RS22580	0.70	-2.5
5,084,699	+		PFLU_RS22580	0.70	-1.3
5,084,699	+		PFLU_RS22580	0.70	-2.3
5,084,699	+		PFLU_RS22580	0.70	-3.2
5,084,699	+		PFLU_RS22580	0.70	-1.4
5,084,699	+		PFLU_RS22580	0.70	-2.5
5,084,699	+		PFLU_RS22580	0.70	-1.3
5,084,699	+		PFLU_RS22580	0.70	-0.6
5,084,699	+		PFLU_RS22580	0.70	-0.0
5,084,699	+		PFLU_RS22580	0.70	-0.1
5,084,699	+		PFLU_RS22580	0.70	-0.3
5,084,699	+		PFLU_RS22580	0.70	-1.3
5,084,700	-		PFLU_RS22580	0.70	-2.8
5,084,700	-		PFLU_RS22580	0.70	-2.2
5,084,700	-		PFLU_RS22580	0.70	-1.0
5,084,700	-		PFLU_RS22580	0.70	-3.1
5,084,700	-		PFLU_RS22580	0.70	-2.0
5,084,700	-		PFLU_RS22580	0.70	-2.2
5,084,700	-		PFLU_RS22580	0.70	-0.3
5,084,700	-		PFLU_RS22580	0.70	+0.3
5,084,700	-		PFLU_RS22580	0.70	-2.1
5,084,700	-		PFLU_RS22580	0.70	-1.4
5,084,700	-		PFLU_RS22580	0.70	-2.6
5,084,700	-		PFLU_RS22580	0.70	-1.9
5,084,700	-		PFLU_RS22580	0.70	-2.1
5,084,700	-		PFLU_RS22580	0.70	-3.9
5,084,700	-		PFLU_RS22580	0.70	-3.2
5,084,700	-		PFLU_RS22580	0.70	-1.3
5,084,700	-		PFLU_RS22580	0.70	+0.1
5,084,700	-		PFLU_RS22580	0.70	-0.8
5,084,700	-		PFLU_RS22580	0.70	-0.6
5,084,700	-		PFLU_RS22580	0.70	-2.1
5,084,754	-		PFLU_RS22580	0.74	-3.8
5,084,803	+		PFLU_RS22580	0.78	-1.4
5,084,804	-		PFLU_RS22580	0.78	-0.2
5,084,804	-		PFLU_RS22580	0.78	-1.5
5,084,804	-		PFLU_RS22580	0.78	-2.4
5,084,945	+		PFLU_RS22580	0.90	-1.1
5,084,946	-				+0.1
5,084,946	-				-2.2
5,084,946	-				-1.8
5,084,946	-				-3.6
5,085,178	+				-0.1
5,085,178	+				-3.9
5,085,178	+				+0.8
5,085,203	+				+0.5
5,085,203	+				-1.1
5,085,203	+				-0.1
5,085,204	-				-0.1
5,085,265	+		PFLU_RS22585	0.12	-1.5
5,085,266	-		PFLU_RS22585	0.12	-1.3
5,085,266	-		PFLU_RS22585	0.12	-0.0
5,085,266	-		PFLU_RS22585	0.12	-3.1
5,085,266	-		PFLU_RS22585	0.12	+0.4
5,085,266	-		PFLU_RS22585	0.12	-2.2
5,085,268	+		PFLU_RS22585	0.12	-1.9
5,085,268	+		PFLU_RS22585	0.12	-0.7
5,085,269	-		PFLU_RS22585	0.12	-1.1
5,085,269	-		PFLU_RS22585	0.12	-1.9
5,085,408	+		PFLU_RS22585	0.20	+1.6
5,085,409	-		PFLU_RS22585	0.20	-0.3
5,085,409	-		PFLU_RS22585	0.20	+1.7
5,085,409	-		PFLU_RS22585	0.20	+0.5
5,085,439	+		PFLU_RS22585	0.22	-0.8
5,085,439	+		PFLU_RS22585	0.22	+1.1
5,085,600	+		PFLU_RS22585	0.32	-2.1
5,085,600	+		PFLU_RS22585	0.32	-1.1
5,085,600	+		PFLU_RS22585	0.32	-0.6
5,085,600	+		PFLU_RS22585	0.32	-0.3
5,085,601	-		PFLU_RS22585	0.32	-1.5
5,085,601	-		PFLU_RS22585	0.32	-1.9
5,085,690	-		PFLU_RS22585	0.37	-0.2
5,085,794	+		PFLU_RS22585	0.44	-2.6
5,085,794	+		PFLU_RS22585	0.44	-1.8
5,085,794	+		PFLU_RS22585	0.44	-2.4
5,085,794	+		PFLU_RS22585	0.44	+0.1
5,085,794	+		PFLU_RS22585	0.44	-0.6
5,085,795	-		PFLU_RS22585	0.44	-2.3
5,085,795	-		PFLU_RS22585	0.44	-0.1
5,085,795	-		PFLU_RS22585	0.44	-0.1
5,085,854	+		PFLU_RS22585	0.47	+0.2
5,085,854	+		PFLU_RS22585	0.47	-0.1
5,085,855	-		PFLU_RS22585	0.47	+0.0
5,085,855	-		PFLU_RS22585	0.47	-2.9
5,085,855	-		PFLU_RS22585	0.47	-2.4
5,085,855	-		PFLU_RS22585	0.47	-2.3
5,086,001	+		PFLU_RS22585	0.56	+0.1
5,086,001	+		PFLU_RS22585	0.56	-0.2
5,086,063	+		PFLU_RS22585	0.60	-1.8
5,086,063	+		PFLU_RS22585	0.60	-0.5
5,086,063	+		PFLU_RS22585	0.60	+1.0
5,086,063	+		PFLU_RS22585	0.60	-2.2
5,086,063	+		PFLU_RS22585	0.60	-0.6
5,086,063	+		PFLU_RS22585	0.60	-1.0
5,086,063	+		PFLU_RS22585	0.60	+0.0
5,086,063	+		PFLU_RS22585	0.60	-0.4
5,086,064	-		PFLU_RS22585	0.60	-1.6
5,086,064	-		PFLU_RS22585	0.60	-0.2
5,086,064	-		PFLU_RS22585	0.60	-2.0
5,086,064	-		PFLU_RS22585	0.60	-2.7
5,086,064	-		PFLU_RS22585	0.60	-1.2
5,086,064	-		PFLU_RS22585	0.60	-2.5
5,086,064	-		PFLU_RS22585	0.60	-3.5
5,086,066	+		PFLU_RS22585	0.60	-1.9
5,086,066	+		PFLU_RS22585	0.60	+0.2
5,086,066	+		PFLU_RS22585	0.60	+0.5
5,086,066	+		PFLU_RS22585	0.60	-1.0
5,086,066	+		PFLU_RS22585	0.60	+0.1
5,086,066	+		PFLU_RS22585	0.60	+0.4
5,086,066	+		PFLU_RS22585	0.60	-1.3
5,086,066	+		PFLU_RS22585	0.60	+0.4
5,086,066	+		PFLU_RS22585	0.60	-1.6
5,086,066	+		PFLU_RS22585	0.60	-0.1
5,086,066	+		PFLU_RS22585	0.60	-0.3
5,086,066	+		PFLU_RS22585	0.60	-1.4
5,086,067	-		PFLU_RS22585	0.60	-0.9
5,086,067	-		PFLU_RS22585	0.60	-0.3
5,086,067	-		PFLU_RS22585	0.60	-1.5
5,086,067	-		PFLU_RS22585	0.60	-2.2
5,086,067	-		PFLU_RS22585	0.60	-0.9
5,086,067	-		PFLU_RS22585	0.60	-1.1
5,086,067	-		PFLU_RS22585	0.60	-2.5
5,086,067	-		PFLU_RS22585	0.60	-0.9
5,086,067	-		PFLU_RS22585	0.60	+1.7
5,086,067	-		PFLU_RS22585	0.60	-2.2
5,086,067	-		PFLU_RS22585	0.60	-2.2
5,086,067	-		PFLU_RS22585	0.60	-1.8
5,086,067	-		PFLU_RS22585	0.60	-1.1
5,086,067	-		PFLU_RS22585	0.60	-2.4
5,086,067	-		PFLU_RS22585	0.60	-1.1
5,086,067	-		PFLU_RS22585	0.60	-1.8
5,086,067	-		PFLU_RS22585	0.60	-1.5
5,086,067	-		PFLU_RS22585	0.60	-2.9
5,086,067	-		PFLU_RS22585	0.60	-1.5