Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20475

Experiment: Glucose (C) and nitrate (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and nitrate (N); with MOPS
4,614,006	+		PFLU_RS20470	0.37	-1.1
4,614,006	+		PFLU_RS20470	0.37	+1.2
4,614,006	+		PFLU_RS20470	0.37	+0.7
4,614,006	+		PFLU_RS20470	0.37	-0.5
4,614,006	+		PFLU_RS20470	0.37	+0.5
4,614,006	+		PFLU_RS20470	0.37	+0.6
4,614,006	+		PFLU_RS20470	0.37	+0.1
4,614,007	-		PFLU_RS20470	0.37	-0.8
4,614,007	-		PFLU_RS20470	0.37	+0.7
4,614,007	-		PFLU_RS20470	0.37	+1.5
4,614,007	-		PFLU_RS20470	0.37	-0.3
4,614,082	+		PFLU_RS20470	0.42	-0.9
4,614,083	-		PFLU_RS20470	0.42	-0.6
4,614,083	-		PFLU_RS20470	0.42	-0.5
4,614,083	-		PFLU_RS20470	0.42	+0.1
4,614,214	+		PFLU_RS20470	0.52	-0.2
4,614,214	+		PFLU_RS20470	0.52	+0.1
4,614,214	+		PFLU_RS20470	0.52	-1.0
4,614,215	-		PFLU_RS20470	0.52	-0.1
4,614,215	-		PFLU_RS20470	0.52	-1.0
4,614,215	-		PFLU_RS20470	0.52	-0.6
4,614,293	+		PFLU_RS20470	0.57	+0.8
4,614,293	+		PFLU_RS20470	0.57	+1.7
4,614,293	+		PFLU_RS20470	0.57	+0.9
4,614,293	+		PFLU_RS20470	0.57	+1.3
4,614,294	-		PFLU_RS20470	0.57	+0.3
4,614,294	-		PFLU_RS20470	0.57	-0.4
4,614,312	+		PFLU_RS20470	0.58	-1.1
4,614,312	+		PFLU_RS20470	0.58	-0.0
4,614,312	+		PFLU_RS20470	0.58	-0.8
4,614,312	+		PFLU_RS20470	0.58	-1.3
4,614,312	+		PFLU_RS20470	0.58	-1.3
4,614,313	-		PFLU_RS20470	0.59	-1.0
4,614,392	-		PFLU_RS20470	0.64	+0.5
4,614,428	-		PFLU_RS20470	0.67	+0.8
4,614,458	+		PFLU_RS20470	0.69	-0.4
4,614,458	+		PFLU_RS20470	0.69	+1.5
4,614,458	+		PFLU_RS20470	0.69	+0.1
4,614,458	+		PFLU_RS20470	0.69	+0.1
4,614,459	-		PFLU_RS20470	0.69	+0.1
4,614,459	-		PFLU_RS20470	0.69	+0.2
4,614,459	-		PFLU_RS20470	0.69	+1.8
4,614,459	-		PFLU_RS20470	0.69	-1.0
4,614,630	+		PFLU_RS20470	0.81	+0.3
4,614,630	+		PFLU_RS20470	0.81	-1.3
4,614,630	+		PFLU_RS20470	0.81	-0.1
4,614,630	+		PFLU_RS20470	0.81	+1.1
4,614,630	+		PFLU_RS20470	0.81	-1.7
4,614,630	+		PFLU_RS20470	0.81	+0.7
4,614,631	-		PFLU_RS20470	0.81	+1.0
4,614,631	-		PFLU_RS20470	0.81	+0.5
4,614,631	-		PFLU_RS20470	0.81	-0.3
4,614,631	-		PFLU_RS20470	0.81	-0.8
4,614,858	+				-2.0
4,614,859	-				-0.3
4,614,859	-				+0.5
4,615,003	+		PFLU_RS20475	0.34	+0.5
4,615,003	+		PFLU_RS20475	0.34	-0.4
4,615,003	+		PFLU_RS20475	0.34	-1.1
4,615,003	+		PFLU_RS20475	0.34	+0.7
4,615,003	+		PFLU_RS20475	0.34	-2.2
4,615,004	-		PFLU_RS20475	0.35	+0.3
4,615,004	-		PFLU_RS20475	0.35	-0.8
4,615,004	-		PFLU_RS20475	0.35	+0.0
4,615,004	-		PFLU_RS20475	0.35	-0.5
4,615,004	-		PFLU_RS20475	0.35	+1.5
4,615,004	-		PFLU_RS20475	0.35	-1.7
4,615,004	-		PFLU_RS20475	0.35	-0.5
4,615,004	-		PFLU_RS20475	0.35	-0.3
4,615,004	-		PFLU_RS20475	0.35	-1.1
4,615,004	-		PFLU_RS20475	0.35	-0.6
4,615,004	-		PFLU_RS20475	0.35	+0.2
4,615,025	-		PFLU_RS20475	0.46	+1.5
4,615,049	+		PFLU_RS20475	0.58	-1.3
4,615,049	+		PFLU_RS20475	0.58	-0.2
4,615,049	+		PFLU_RS20475	0.58	+1.5
4,615,049	+		PFLU_RS20475	0.58	-1.7
4,615,049	+		PFLU_RS20475	0.58	+1.2
4,615,049	+		PFLU_RS20475	0.58	+1.5
4,615,049	+		PFLU_RS20475	0.58	-0.8
4,615,050	-		PFLU_RS20475	0.58	+0.9
4,615,050	-		PFLU_RS20475	0.58	+0.3
4,615,050	-		PFLU_RS20475	0.58	-0.4
4,615,050	-		PFLU_RS20475	0.58	+0.2
4,615,050	-		PFLU_RS20475	0.58	+2.6
4,615,050	-		PFLU_RS20475	0.58	+1.8
4,615,050	-		PFLU_RS20475	0.58	+0.5
4,615,050	-		PFLU_RS20475	0.58	+0.3
4,615,056	+		PFLU_RS20475	0.62	-0.9
4,615,056	+		PFLU_RS20475	0.62	-0.4
4,615,091	+		PFLU_RS20475	0.79	-1.4
4,615,092	-		PFLU_RS20475	0.80	-2.8
4,615,092	-		PFLU_RS20475	0.80	-0.4
4,615,217	-				+1.2
4,615,217	-				+0.8
4,615,217	-				-0.8
4,615,384	-				-0.8
4,615,384	-				+4.1
4,615,384	-				-1.0
4,615,389	+				+0.5
4,615,461	+				+0.9
4,615,461	+				-0.3
4,615,462	-				+0.2
4,615,462	-				-0.6
4,615,462	-				-0.1
4,615,485	+				-0.0
4,615,532	+				-0.0
4,615,533	-				-0.1
4,615,533	-				-0.7
4,615,533	-				+0.9
4,615,533	-				+0.5
4,615,535	+				-0.1
4,615,535	+				-0.2
4,615,535	+				-0.3
4,615,739	+		PFLU_RS20485	0.18	+0.5
4,615,739	+		PFLU_RS20485	0.18	-1.3
4,615,739	+		PFLU_RS20485	0.18	+1.2
4,615,739	+		PFLU_RS20485	0.18	+0.1
4,615,739	+		PFLU_RS20485	0.18	+0.3
4,615,740	-		PFLU_RS20485	0.18	-0.3
4,615,740	-		PFLU_RS20485	0.18	+0.5
4,615,740	-		PFLU_RS20485	0.18	-0.3
4,615,740	-		PFLU_RS20485	0.18	+0.8
4,615,850	+		PFLU_RS20485	0.27	-1.1
4,615,850	+		PFLU_RS20485	0.27	-1.1
4,615,850	+		PFLU_RS20485	0.27	-1.8
4,615,850	+		PFLU_RS20485	0.27	-0.7
4,615,851	-		PFLU_RS20485	0.27	-0.2
4,615,851	-		PFLU_RS20485	0.27	-0.0
4,615,851	-		PFLU_RS20485	0.27	-2.3
4,615,851	-		PFLU_RS20485	0.27	+1.5
4,615,998	+		PFLU_RS20485	0.38	-1.4
4,615,998	+		PFLU_RS20485	0.38	-1.8
4,615,998	+		PFLU_RS20485	0.38	-2.1
4,615,998	+		PFLU_RS20485	0.38	-1.6
4,615,998	+		PFLU_RS20485	0.38	+0.2
4,615,999	-		PFLU_RS20485	0.38	-0.2
4,615,999	-		PFLU_RS20485	0.38	+0.0
4,615,999	-		PFLU_RS20485	0.38	-0.3
4,616,015	+		PFLU_RS20485	0.40	+0.7
4,616,015	+		PFLU_RS20485	0.40	+0.5
4,616,015	+		PFLU_RS20485	0.40	-1.2
4,616,015	+		PFLU_RS20485	0.40	-1.2
4,616,015	+		PFLU_RS20485	0.40	+0.5
4,616,015	+		PFLU_RS20485	0.40	+0.2
4,616,015	+		PFLU_RS20485	0.40	+1.1
4,616,015	+		PFLU_RS20485	0.40	-1.6
4,616,015	+		PFLU_RS20485	0.40	+2.5
4,616,015	+		PFLU_RS20485	0.40	-0.9
4,616,015	+		PFLU_RS20485	0.40	-0.5
4,616,015	+		PFLU_RS20485	0.40	-1.2
4,616,015	+		PFLU_RS20485	0.40	+0.7
4,616,015	+		PFLU_RS20485	0.40	+0.7
4,616,015	+		PFLU_RS20485	0.40	-0.5
4,616,015	+		PFLU_RS20485	0.40	-0.8
4,616,015	+		PFLU_RS20485	0.40	-0.1
4,616,015	+		PFLU_RS20485	0.40	+0.5
4,616,015	+		PFLU_RS20485	0.40	-0.6
4,616,015	+		PFLU_RS20485	0.40	+0.6
4,616,015	+		PFLU_RS20485	0.40	-1.1
4,616,015	+		PFLU_RS20485	0.40	+4.1
4,616,015	+		PFLU_RS20485	0.40	-0.0
4,616,015	+		PFLU_RS20485	0.40	+0.1
4,616,015	+		PFLU_RS20485	0.40	+0.2
4,616,015	+		PFLU_RS20485	0.40	-0.6
4,616,015	+		PFLU_RS20485	0.40	+0.5
4,616,015	+		PFLU_RS20485	0.40	+0.7
4,616,015	+		PFLU_RS20485	0.40	-0.8
4,616,015	+		PFLU_RS20485	0.40	-0.1
4,616,015	+		PFLU_RS20485	0.40	+0.7
4,616,015	+		PFLU_RS20485	0.40	-0.5
4,616,015	+		PFLU_RS20485	0.40	-1.7
4,616,015	+		PFLU_RS20485	0.40	-1.3
4,616,015	+		PFLU_RS20485	0.40	+0.7
4,616,015	+		PFLU_RS20485	0.40	+1.2
4,616,016	-		PFLU_RS20485	0.40	-0.8
4,616,016	-		PFLU_RS20485	0.40	-0.5
4,616,016	-		PFLU_RS20485	0.40	-0.7
4,616,016	-		PFLU_RS20485	0.40	-0.3
4,616,016	-		PFLU_RS20485	0.40	-1.3
4,616,016	-		PFLU_RS20485	0.40	-0.4
4,616,016	-		PFLU_RS20485	0.40	+0.5
4,616,016	-		PFLU_RS20485	0.40	-0.3
4,616,016	-		PFLU_RS20485	0.40	-0.1
4,616,016	-		PFLU_RS20485	0.40	+0.2
4,616,016	-		PFLU_RS20485	0.40	+0.1
4,616,016	-		PFLU_RS20485	0.40	+0.2
4,616,016	-		PFLU_RS20485	0.40	-0.8
4,616,016	-		PFLU_RS20485	0.40	-0.0
4,616,016	-		PFLU_RS20485	0.40	+1.5
4,616,016	-		PFLU_RS20485	0.40	+0.9
4,616,016	-		PFLU_RS20485	0.40	-0.4
4,616,016	-		PFLU_RS20485	0.40	+0.5
4,616,016	-		PFLU_RS20485	0.40	-0.8
4,616,016	-		PFLU_RS20485	0.40	+0.8
4,616,016	-		PFLU_RS20485	0.40	-0.3
4,616,016	-		PFLU_RS20485	0.40	-0.7
4,616,016	-		PFLU_RS20485	0.40	+0.5
4,616,016	-		PFLU_RS20485	0.40	-2.9
4,616,016	-		PFLU_RS20485	0.40	+1.3
4,616,016	-		PFLU_RS20485	0.40	-1.6
4,616,016	-		PFLU_RS20485	0.40	-0.0
4,616,016	-		PFLU_RS20485	0.40	+0.7
4,616,016	-		PFLU_RS20485	0.40	+0.2
4,616,016	-		PFLU_RS20485	0.40	-1.3
4,616,016	-		PFLU_RS20485	0.40	+1.3
4,616,016	-		PFLU_RS20485	0.40	-0.1
4,616,016	-		PFLU_RS20485	0.40	+0.2
4,616,016	-		PFLU_RS20485	0.40	+0.9
4,616,016	-		PFLU_RS20485	0.40	+1.3
4,616,016	-		PFLU_RS20485	0.40	-0.4
4,616,016	-		PFLU_RS20485	0.40	+0.6
4,616,016	-		PFLU_RS20485	0.40	+1.1
4,616,016	-		PFLU_RS20485	0.40	-0.1
4,616,114	+		PFLU_RS20485	0.47	+1.5
4,616,114	+		PFLU_RS20485	0.47	+0.6
4,616,114	+		PFLU_RS20485	0.47	+0.3
4,616,114	+		PFLU_RS20485	0.47	+2.1
4,616,114	+		PFLU_RS20485	0.47	+1.9
4,616,114	+		PFLU_RS20485	0.47	+1.1
4,616,115	-		PFLU_RS20485	0.48	-1.5
4,616,115	-		PFLU_RS20485	0.48	+0.3
4,616,115	-		PFLU_RS20485	0.48	-0.0