Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10180

Experiment: Glucose (C) and nitrate (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and nitrate (N); with MOPS
2,241,937	+		PFLU_RS10170	0.79	+1.7
2,241,937	+		PFLU_RS10170	0.79	-0.4
2,241,937	+		PFLU_RS10170	0.79	-2.1
2,241,937	+		PFLU_RS10170	0.79	+1.2
2,241,937	+		PFLU_RS10170	0.79	+1.4
2,241,937	+		PFLU_RS10170	0.79	+0.2
2,241,938	-		PFLU_RS10170	0.79	+1.7
2,241,938	-		PFLU_RS10170	0.79	+1.7
2,241,938	-		PFLU_RS10170	0.79	-0.4
2,241,938	-		PFLU_RS10170	0.79	+1.1
2,241,938	-		PFLU_RS10170	0.79	+0.4
2,241,938	-		PFLU_RS10170	0.79	+0.5
2,241,938	-		PFLU_RS10170	0.79	+0.4
2,241,938	-		PFLU_RS10170	0.79	-0.6
2,241,938	-		PFLU_RS10170	0.79	+0.3
2,241,938	-		PFLU_RS10170	0.79	+0.3
2,241,938	-		PFLU_RS10170	0.79	+0.4
2,242,041	+		PFLU_RS10170	0.84	+0.8
2,242,055	+		PFLU_RS10170	0.85	+0.4
2,242,056	-		PFLU_RS10170	0.85	-0.6
2,242,056	-		PFLU_RS10170	0.85	+0.9
2,242,056	-		PFLU_RS10170	0.85	+0.5
2,242,056	-		PFLU_RS10170	0.85	+0.5
2,242,065	-		PFLU_RS10170	0.86	-0.2
2,242,101	+		PFLU_RS10170	0.87	-0.2
2,242,101	+		PFLU_RS10170	0.87	+0.7
2,242,101	+		PFLU_RS10170	0.87	-3.0
2,242,101	+		PFLU_RS10170	0.87	-0.1
2,242,101	+		PFLU_RS10170	0.87	-0.5
2,242,101	+		PFLU_RS10170	0.87	-0.5
2,242,101	+		PFLU_RS10170	0.87	+0.5
2,242,101	+		PFLU_RS10170	0.87	-0.0
2,242,101	+		PFLU_RS10170	0.87	-1.1
2,242,102	-		PFLU_RS10170	0.88	-1.8
2,242,102	-		PFLU_RS10170	0.88	-0.2
2,242,102	-		PFLU_RS10170	0.88	+1.0
2,242,102	-		PFLU_RS10170	0.88	+0.4
2,242,103	+		PFLU_RS10170	0.88	+0.8
2,242,137	-		PFLU_RS10170	0.89	+0.2
2,242,265	-				+0.7
2,242,296	+				-0.7
2,242,296	+				+1.4
2,242,297	-				+2.0
2,242,335	+				-1.0
2,242,335	+				+1.0
2,242,336	-				+1.4
2,242,366	+				+1.4
2,242,366	+				-0.2
2,242,366	+				+2.4
2,242,366	+				+0.3
2,242,366	+				-1.8
2,242,366	+				-0.5
2,242,366	+				-0.2
2,242,366	+				-0.2
2,242,367	-				-0.6
2,242,367	-				+0.2
2,242,367	-				+0.4
2,242,367	-				-0.5
2,242,367	-				+0.9
2,242,367	-				-0.3
2,242,376	+				-0.2
2,242,376	+				-0.7
2,242,376	+				-0.4
2,242,377	-				+0.0
2,242,377	-				+0.3
2,242,377	-				-1.4
2,242,377	-				+1.1
2,242,377	-				+0.2
2,242,377	-				+1.0
2,242,740	+				-0.6
2,242,741	-				+1.5
2,242,741	-				-2.2
2,242,745	+				+0.4
2,242,745	+				-0.2
2,242,746	-				+0.5
2,242,746	-				+0.5
2,242,746	-				-1.4
2,242,781	+				-0.6
2,242,781	+				-1.6
2,242,781	+				+2.0
2,242,781	+				-1.0
2,242,781	+				-0.7
2,242,781	+				-0.2
2,242,781	+				+1.8
2,242,781	+				+0.0
2,242,782	-				-2.0
2,242,782	-				-0.2
2,242,782	-				+1.7
2,242,782	-				-0.3
2,242,782	-				-0.8
2,242,782	-				+0.4
2,242,782	-				-0.2
2,242,782	-				-0.5
2,242,788	+				+1.5
2,242,788	+				+0.6
2,242,788	+				+0.4
2,242,788	+				+0.2
2,242,789	-				+1.2
2,242,789	-				+0.7
2,242,789	-				+0.2
2,242,789	-				+1.4
2,242,789	-				+0.4
2,242,789	-				+1.4
2,242,801	+				-1.1
2,242,801	+				-0.1
2,242,801	+				+0.3
2,242,802	-				+0.2
2,242,802	-				-0.6
2,242,802	-				-1.0
2,242,816	-				-0.6
2,242,816	-				+1.1
2,242,816	-				-0.4
2,242,838	+				+0.2
2,242,838	+				+1.1
2,242,838	+				-0.1
2,242,838	+				+0.8
2,242,838	+				-0.4
2,242,838	+				+0.2
2,242,838	+				-0.1
2,242,838	+				-2.4
2,242,838	+				-0.5
2,242,838	+				+1.4
2,242,838	+				-1.8
2,242,838	+				+0.2
2,242,838	+				+1.0
2,242,838	+				+1.0
2,242,838	+				+2.3
2,242,838	+				+0.0
2,242,838	+				-0.6
2,242,838	+				-0.6
2,242,838	+				-1.2
2,242,839	-				+2.3
2,242,839	-				+0.3
2,242,839	-				-1.4
2,242,839	-				+1.1
2,242,839	-				+1.4
2,242,839	-				+0.6
2,242,839	-				-0.1
2,242,839	-				+0.8
2,242,839	-				+1.1
2,242,839	-				-0.3
2,242,839	-				-0.6
2,242,839	-				-0.4
2,242,839	-				-0.6
2,242,839	-				-1.0
2,242,839	-				-0.2
2,242,839	-				+0.1
2,242,839	-				+0.4
2,242,846	+				-0.0
2,242,846	+				-1.9
2,242,846	+				-0.2
2,242,846	+				-1.6
2,242,846	+				+0.7
2,242,846	+				+0.4
2,242,846	+				+0.2
2,242,846	+				-1.6
2,242,846	+				+2.2
2,242,846	+				+0.1
2,242,846	+				+0.7
2,242,846	+				-0.3
2,242,846	+				+1.4
2,242,846	+				+0.1
2,242,846	+				+0.9
2,242,847	-				-0.5
2,242,847	-				-1.0
2,242,847	-				-0.4
2,242,847	-				-1.5
2,242,847	-				+0.5
2,242,847	-				+0.8
2,242,847	-				-1.5
2,242,847	-				-1.2
2,242,847	-				-0.0
2,242,847	-				+0.3
2,242,849	+				+0.4
2,242,849	+				+0.8
2,242,849	+				-1.4
2,242,849	+				+0.5
2,242,850	-				-1.0
2,242,850	-				+0.2
2,242,850	-				+0.8
2,242,850	-				+0.2
2,242,858	+				+0.6
2,242,858	+				-0.3
2,242,858	+				-0.2
2,242,858	+				+0.7
2,242,858	+				+0.4
2,242,858	+				-1.4
2,242,858	+				-2.0
2,242,858	+				-0.3
2,242,858	+				+1.1
2,242,858	+				-0.4
2,242,858	+				-0.9
2,242,858	+				-0.4
2,242,858	+				+0.3
2,242,858	+				+0.2
2,242,858	+				-0.2
2,242,859	-				-1.9
2,242,859	-				+0.8
2,242,859	-				-0.1
2,242,859	-				-0.5
2,242,859	-				-0.3
2,242,859	-				+0.3
2,242,859	-				+0.2
2,242,859	-				+1.0
2,242,889	+		PFLU_RS10180	0.11	+0.6
2,242,889	+		PFLU_RS10180	0.11	-0.7
2,242,890	-		PFLU_RS10180	0.11	-1.4
2,242,890	-		PFLU_RS10180	0.11	-0.1
2,242,951	+		PFLU_RS10180	0.24	+0.9
2,242,952	-		PFLU_RS10180	0.24	-0.2
2,242,994	+		PFLU_RS10180	0.33	+1.0
2,242,994	+		PFLU_RS10180	0.33	-0.3
2,242,995	-		PFLU_RS10180	0.33	-0.5
2,242,995	-		PFLU_RS10180	0.33	-1.8
2,242,995	-		PFLU_RS10180	0.33	-1.0
2,242,995	-		PFLU_RS10180	0.33	-0.2
2,243,001	+		PFLU_RS10180	0.35	+0.3
2,243,001	+		PFLU_RS10180	0.35	+0.4
2,243,109	+		PFLU_RS10180	0.58	-0.0
2,243,280	+				-0.6
2,243,281	-				+0.4
2,243,281	-				-0.6
2,243,304	+				+0.2
2,243,373	-				-0.5
2,243,373	-				+1.0
2,243,373	-				-1.3
2,243,399	-				-1.8
2,243,399	-				+0.1
2,243,446	-				-1.6
2,243,446	-				-1.0
2,243,446	-				-1.8
2,243,649	+				-0.6
2,243,650	-				-0.4
2,243,650	-				+1.1
2,243,650	-				+1.0
2,243,684	+		PFLU_RS10185	0.10	-0.7
2,243,684	+		PFLU_RS10185	0.10	-0.8
2,243,684	+		PFLU_RS10185	0.10	-0.9
2,243,684	+		PFLU_RS10185	0.10	+0.6
2,243,684	+		PFLU_RS10185	0.10	-0.0
2,243,684	+		PFLU_RS10185	0.10	+1.1
2,243,684	+		PFLU_RS10185	0.10	-1.6
2,243,684	+		PFLU_RS10185	0.10	+0.2
2,243,684	+		PFLU_RS10185	0.10	+0.8
2,243,684	+		PFLU_RS10185	0.10	+1.9
2,243,684	+		PFLU_RS10185	0.10	+0.6
2,243,685	-		PFLU_RS10185	0.10	-2.0
2,243,685	-		PFLU_RS10185	0.10	-0.2
2,243,685	-		PFLU_RS10185	0.10	+0.4
2,243,685	-		PFLU_RS10185	0.10	+0.0
2,243,685	-		PFLU_RS10185	0.10	+1.4
2,243,685	-		PFLU_RS10185	0.10	-1.3
2,243,685	-		PFLU_RS10185	0.10	-0.9
2,243,685	-		PFLU_RS10185	0.10	+0.8
2,243,685	-		PFLU_RS10185	0.10	-2.0
2,243,685	-		PFLU_RS10185	0.10	-0.4
2,243,685	-		PFLU_RS10185	0.10	+0.6
2,243,685	-		PFLU_RS10185	0.10	-0.7
2,243,685	-		PFLU_RS10185	0.10	-1.0
2,243,685	-		PFLU_RS10185	0.10	+0.7
2,243,685	-		PFLU_RS10185	0.10	+0.1
2,243,685	-		PFLU_RS10185	0.10	-0.6
2,243,685	-		PFLU_RS10185	0.10	+0.3
2,243,685	-		PFLU_RS10185	0.10	-1.0
2,243,685	-		PFLU_RS10185	0.10	+1.0
2,243,685	-		PFLU_RS10185	0.10	-2.5
2,243,686	+		PFLU_RS10185	0.11	-1.2
2,243,686	+		PFLU_RS10185	0.11	+1.8
2,243,686	+		PFLU_RS10185	0.11	+0.4
2,243,687	-		PFLU_RS10185	0.11	-0.3
2,243,687	-		PFLU_RS10185	0.11	+0.0
2,243,687	-		PFLU_RS10185	0.11	-0.9
2,243,687	-		PFLU_RS10185	0.11	-1.1
2,243,750	+		PFLU_RS10185	0.13	+0.7
2,243,750	+		PFLU_RS10185	0.13	-0.6
2,243,750	+		PFLU_RS10185	0.13	+1.6
2,243,750	+		PFLU_RS10185	0.13	+0.8
2,243,751	-		PFLU_RS10185	0.13	+1.2
2,243,751	-		PFLU_RS10185	0.13	-0.5
2,243,751	-		PFLU_RS10185	0.13	-0.7
2,243,751	-		PFLU_RS10185	0.13	+0.9
2,243,780	+		PFLU_RS10185	0.15	+1.8
2,243,781	-		PFLU_RS10185	0.15	-0.1
2,243,781	-		PFLU_RS10185	0.15	+0.4
2,243,781	-		PFLU_RS10185	0.15	+0.4
2,243,781	-		PFLU_RS10185	0.15	+0.6
2,243,781	-		PFLU_RS10185	0.15	-0.5
2,243,781	-		PFLU_RS10185	0.15	+1.4
2,243,939	+		PFLU_RS10185	0.21	-0.5
2,243,939	+		PFLU_RS10185	0.21	-0.3
2,243,940	-		PFLU_RS10185	0.21	+1.2
2,243,978	+		PFLU_RS10185	0.23	-1.0
2,243,978	+		PFLU_RS10185	0.23	-0.9
2,243,978	+		PFLU_RS10185	0.23	-1.3
2,243,978	+		PFLU_RS10185	0.23	-1.6
2,243,978	+		PFLU_RS10185	0.23	-0.2
2,243,978	+		PFLU_RS10185	0.23	+0.8
2,243,978	+		PFLU_RS10185	0.23	-0.9
2,243,978	+		PFLU_RS10185	0.23	-1.3
2,243,978	+		PFLU_RS10185	0.23	+1.2
2,243,978	+		PFLU_RS10185	0.23	+1.4
2,243,978	+		PFLU_RS10185	0.23	-0.1
2,243,978	+		PFLU_RS10185	0.23	-0.6
2,243,979	-		PFLU_RS10185	0.23	-0.6
2,243,979	-		PFLU_RS10185	0.23	-0.6
2,243,979	-		PFLU_RS10185	0.23	-1.0
2,243,979	-		PFLU_RS10185	0.23	-0.6
2,243,979	-		PFLU_RS10185	0.23	-0.9
2,243,979	-		PFLU_RS10185	0.23	+0.4
2,243,979	-		PFLU_RS10185	0.23	-1.4
2,243,979	-		PFLU_RS10185	0.23	-0.0
2,243,979	-		PFLU_RS10185	0.23	-1.0
2,243,979	-		PFLU_RS10185	0.23	+0.9
2,243,979	-		PFLU_RS10185	0.23	+0.1
2,244,019	+		PFLU_RS10185	0.25	-0.5
2,244,020	-		PFLU_RS10185	0.25	-0.5
2,244,029	+		PFLU_RS10185	0.25	-0.6
2,244,030	-		PFLU_RS10185	0.25	+0.0
2,244,030	-		PFLU_RS10185	0.25	+1.4
2,244,030	-		PFLU_RS10185	0.25	+0.2
2,244,196	+		PFLU_RS10185	0.32	-0.6
2,244,196	+		PFLU_RS10185	0.32	-0.4
2,244,196	+		PFLU_RS10185	0.32	-0.5
2,244,196	+		PFLU_RS10185	0.32	+0.7
2,244,230	+		PFLU_RS10185	0.34	-0.6
2,244,230	+		PFLU_RS10185	0.34	+1.4
2,244,230	+		PFLU_RS10185	0.34	-1.2
2,244,230	+		PFLU_RS10185	0.34	-0.2
2,244,231	-		PFLU_RS10185	0.34	+1.0
2,244,268	+		PFLU_RS10185	0.35	+2.2
2,244,268	+		PFLU_RS10185	0.35	+0.8