Experiment: Lactitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21130 and SM_b21131 are separated by 15 nucleotides SM_b21131 and SM_b21132 overlap by 17 nucleotides SM_b21132 and SM_b21133 overlap by 4 nucleotides
SM_b21130: SM_b21130 - sulfate ABC transporter ATP-binding protein, at 769,044 to 770,147
_b21130
SM_b21131: SM_b21131 - sulfate ABC transporter permease, at 770,163 to 771,044
_b21131
SM_b21132: SM_b21132 - sulfate ABC transporter permease, at 771,028 to 771,894
_b21132
SM_b21133: SM_b21133 - sulfate ABC transporter substrate-binding protein, at 771,891 to 772,916
_b21133
Position (kb) 770
771
772 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 769.211 kb on + strand, within SM_b21130 at 769.211 kb on + strand, within SM_b21130 at 769.212 kb on - strand, within SM_b21130 at 769.212 kb on - strand, within SM_b21130 at 769.212 kb on - strand, within SM_b21130 at 769.212 kb on - strand, within SM_b21130 at 769.327 kb on + strand, within SM_b21130 at 769.474 kb on + strand, within SM_b21130 at 769.474 kb on + strand, within SM_b21130 at 769.474 kb on + strand, within SM_b21130 at 769.474 kb on + strand, within SM_b21130 at 769.474 kb on + strand, within SM_b21130 at 769.475 kb on - strand, within SM_b21130 at 769.475 kb on - strand, within SM_b21130 at 770.285 kb on + strand, within SM_b21131 at 770.286 kb on - strand, within SM_b21131 at 770.286 kb on - strand, within SM_b21131 at 770.286 kb on - strand, within SM_b21131 at 770.287 kb on + strand at 770.288 kb on - strand, within SM_b21131 at 770.294 kb on + strand, within SM_b21131 at 770.294 kb on + strand, within SM_b21131 at 770.294 kb on + strand, within SM_b21131 at 770.294 kb on + strand, within SM_b21131 at 770.296 kb on + strand, within SM_b21131 at 770.342 kb on + strand, within SM_b21131 at 770.427 kb on + strand, within SM_b21131 at 770.428 kb on - strand, within SM_b21131 at 770.429 kb on + strand, within SM_b21131 at 770.611 kb on + strand, within SM_b21131 at 770.611 kb on + strand, within SM_b21131 at 770.612 kb on - strand, within SM_b21131 at 770.640 kb on - strand, within SM_b21131 at 771.008 kb on + strand at 771.009 kb on - strand at 771.012 kb on - strand at 771.012 kb on - strand at 771.020 kb on - strand at 771.038 kb on + strand at 771.044 kb on + strand at 771.044 kb on + strand at 771.230 kb on + strand, within SM_b21132 at 771.231 kb on - strand, within SM_b21132 at 771.510 kb on - strand, within SM_b21132 at 771.510 kb on - strand, within SM_b21132 at 771.908 kb on - strand at 771.908 kb on - strand at 771.908 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lactitol (C) remove 769,211 + SM_b21130 0.15 -0.3 769,211 + SM_b21130 0.15 -0.1 769,212 - SM_b21130 0.15 -0.9 769,212 - SM_b21130 0.15 -1.4 769,212 - SM_b21130 0.15 +0.1 769,212 - SM_b21130 0.15 -1.8 769,327 + SM_b21130 0.26 -0.7 769,474 + SM_b21130 0.39 -0.6 769,474 + SM_b21130 0.39 +0.7 769,474 + SM_b21130 0.39 -1.3 769,474 + SM_b21130 0.39 +3.9 769,474 + SM_b21130 0.39 +1.0 769,475 - SM_b21130 0.39 -1.5 769,475 - SM_b21130 0.39 -1.6 770,285 + SM_b21131 0.14 -1.8 770,286 - SM_b21131 0.14 -1.0 770,286 - SM_b21131 0.14 -1.4 770,286 - SM_b21131 0.14 -3.2 770,287 + -0.5 770,288 - SM_b21131 0.14 -0.0 770,294 + SM_b21131 0.15 -0.7 770,294 + SM_b21131 0.15 +0.3 770,294 + SM_b21131 0.15 -0.4 770,294 + SM_b21131 0.15 +0.0 770,296 + SM_b21131 0.15 -0.6 770,342 + SM_b21131 0.20 -0.3 770,427 + SM_b21131 0.30 -1.3 770,428 - SM_b21131 0.30 -1.3 770,429 + SM_b21131 0.30 -1.6 770,611 + SM_b21131 0.51 -0.2 770,611 + SM_b21131 0.51 -1.4 770,612 - SM_b21131 0.51 +1.3 770,640 - SM_b21131 0.54 -1.0 771,008 + +0.1 771,009 - +0.2 771,012 - +0.1 771,012 - -1.0 771,020 - -1.0 771,038 + -0.9 771,044 + -0.6 771,044 + -0.4 771,230 + SM_b21132 0.23 -0.2 771,231 - SM_b21132 0.23 -0.3 771,510 - SM_b21132 0.56 -0.0 771,510 - SM_b21132 0.56 -0.0 771,908 - +0.1 771,908 - -0.2 771,908 - -1.9
Or see this region's nucleotide sequence