Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14750

Experiment: RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14745 and BWI76_RS14750 are separated by 126 nucleotidesBWI76_RS14750 and BWI76_RS14755 are separated by 14 nucleotidesBWI76_RS14755 and BWI76_RS14760 are separated by 16 nucleotides BWI76_RS14745: BWI76_RS14745 - NAD-dependent epimerase/dehydratase, at 3,094,002 to 3,095,057 _RS14745 BWI76_RS14750: BWI76_RS14750 - transcriptional regulator, at 3,095,184 to 3,095,939 _RS14750 BWI76_RS14755: BWI76_RS14755 - SIS domain-containing protein, at 3,095,954 to 3,096,694 _RS14755 BWI76_RS14760: BWI76_RS14760 - PTS ascorbate transporter subunit IIC, at 3,096,711 to 3,098,021 _RS14760 Position (kb) 3095 3096Strain fitness (log2 ratio) -2 -1 0 1at 3094.231 kb on + strand, within BWI76_RS14745at 3094.233 kb on + strand, within BWI76_RS14745at 3094.333 kb on + strand, within BWI76_RS14745at 3094.341 kb on - strand, within BWI76_RS14745at 3094.341 kb on - strand, within BWI76_RS14745at 3094.440 kb on + strand, within BWI76_RS14745at 3094.484 kb on + strand, within BWI76_RS14745at 3094.612 kb on + strand, within BWI76_RS14745at 3094.625 kb on - strand, within BWI76_RS14745at 3094.636 kb on - strand, within BWI76_RS14745at 3094.747 kb on + strand, within BWI76_RS14745at 3094.785 kb on - strand, within BWI76_RS14745at 3094.795 kb on - strand, within BWI76_RS14745at 3094.813 kb on + strand, within BWI76_RS14745at 3095.677 kb on - strand, within BWI76_RS14750at 3095.740 kb on + strand, within BWI76_RS14750at 3095.748 kb on - strand, within BWI76_RS14750at 3095.750 kb on + strand, within BWI76_RS14750at 3095.773 kb on - strand, within BWI76_RS14750at 3095.778 kb on - strand, within BWI76_RS14750at 3095.905 kb on - strandat 3096.093 kb on - strand, within BWI76_RS14755at 3096.210 kb on + strand, within BWI76_RS14755at 3096.482 kb on - strand, within BWI76_RS14755at 3096.482 kb on - strand, within BWI76_RS14755at 3096.647 kb on - strandat 3096.859 kb on - strand, within BWI76_RS14760

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
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3,094,231 + BWI76_RS14745 0.22 +0.5
3,094,233 + BWI76_RS14745 0.22 +0.0
3,094,333 + BWI76_RS14745 0.31 -0.2
3,094,341 - BWI76_RS14745 0.32 +0.8
3,094,341 - BWI76_RS14745 0.32 +0.1
3,094,440 + BWI76_RS14745 0.41 +0.3
3,094,484 + BWI76_RS14745 0.46 +0.2
3,094,612 + BWI76_RS14745 0.58 +0.7
3,094,625 - BWI76_RS14745 0.59 -0.3
3,094,636 - BWI76_RS14745 0.60 +0.1
3,094,747 + BWI76_RS14745 0.71 +0.2
3,094,785 - BWI76_RS14745 0.74 +0.1
3,094,795 - BWI76_RS14745 0.75 +1.2
3,094,813 + BWI76_RS14745 0.77 +0.0
3,095,677 - BWI76_RS14750 0.65 +0.9
3,095,740 + BWI76_RS14750 0.74 +1.4
3,095,748 - BWI76_RS14750 0.75 +1.0
3,095,750 + BWI76_RS14750 0.75 +0.5
3,095,773 - BWI76_RS14750 0.78 +0.4
3,095,778 - BWI76_RS14750 0.79 +1.4
3,095,905 - +1.1
3,096,093 - BWI76_RS14755 0.19 -2.1
3,096,210 + BWI76_RS14755 0.35 +0.4
3,096,482 - BWI76_RS14755 0.71 -0.5
3,096,482 - BWI76_RS14755 0.71 +0.5
3,096,647 - +0.1
3,096,859 - BWI76_RS14760 0.11 +0.6

Or see this region's nucleotide sequence