Experiment: RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14745 and BWI76_RS14750 are separated by 126 nucleotides BWI76_RS14750 and BWI76_RS14755 are separated by 14 nucleotides BWI76_RS14755 and BWI76_RS14760 are separated by 16 nucleotides
BWI76_RS14745: BWI76_RS14745 - NAD-dependent epimerase/dehydratase, at 3,094,002 to 3,095,057
_RS14745
BWI76_RS14750: BWI76_RS14750 - transcriptional regulator, at 3,095,184 to 3,095,939
_RS14750
BWI76_RS14755: BWI76_RS14755 - SIS domain-containing protein, at 3,095,954 to 3,096,694
_RS14755
BWI76_RS14760: BWI76_RS14760 - PTS ascorbate transporter subunit IIC, at 3,096,711 to 3,098,021
_RS14760
Position (kb)
3095
3096 Strain fitness (log2 ratio)
-2
-1
0
1 at 3094.231 kb on + strand, within BWI76_RS14745 at 3094.233 kb on + strand, within BWI76_RS14745 at 3094.333 kb on + strand, within BWI76_RS14745 at 3094.341 kb on - strand, within BWI76_RS14745 at 3094.341 kb on - strand, within BWI76_RS14745 at 3094.440 kb on + strand, within BWI76_RS14745 at 3094.484 kb on + strand, within BWI76_RS14745 at 3094.612 kb on + strand, within BWI76_RS14745 at 3094.625 kb on - strand, within BWI76_RS14745 at 3094.636 kb on - strand, within BWI76_RS14745 at 3094.747 kb on + strand, within BWI76_RS14745 at 3094.785 kb on - strand, within BWI76_RS14745 at 3094.795 kb on - strand, within BWI76_RS14745 at 3094.813 kb on + strand, within BWI76_RS14745 at 3095.677 kb on - strand, within BWI76_RS14750 at 3095.740 kb on + strand, within BWI76_RS14750 at 3095.748 kb on - strand, within BWI76_RS14750 at 3095.750 kb on + strand, within BWI76_RS14750 at 3095.773 kb on - strand, within BWI76_RS14750 at 3095.778 kb on - strand, within BWI76_RS14750 at 3095.905 kb on - strand at 3096.093 kb on - strand, within BWI76_RS14755 at 3096.210 kb on + strand, within BWI76_RS14755 at 3096.482 kb on - strand, within BWI76_RS14755 at 3096.482 kb on - strand, within BWI76_RS14755 at 3096.647 kb on - strand at 3096.859 kb on - strand, within BWI76_RS14760
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 3,094,231 + BWI76_RS14745 0.22 +0.5 3,094,233 + BWI76_RS14745 0.22 +0.0 3,094,333 + BWI76_RS14745 0.31 -0.2 3,094,341 - BWI76_RS14745 0.32 +0.8 3,094,341 - BWI76_RS14745 0.32 +0.1 3,094,440 + BWI76_RS14745 0.41 +0.3 3,094,484 + BWI76_RS14745 0.46 +0.2 3,094,612 + BWI76_RS14745 0.58 +0.7 3,094,625 - BWI76_RS14745 0.59 -0.3 3,094,636 - BWI76_RS14745 0.60 +0.1 3,094,747 + BWI76_RS14745 0.71 +0.2 3,094,785 - BWI76_RS14745 0.74 +0.1 3,094,795 - BWI76_RS14745 0.75 +1.2 3,094,813 + BWI76_RS14745 0.77 +0.0 3,095,677 - BWI76_RS14750 0.65 +0.9 3,095,740 + BWI76_RS14750 0.74 +1.4 3,095,748 - BWI76_RS14750 0.75 +1.0 3,095,750 + BWI76_RS14750 0.75 +0.5 3,095,773 - BWI76_RS14750 0.78 +0.4 3,095,778 - BWI76_RS14750 0.79 +1.4 3,095,905 - +1.1 3,096,093 - BWI76_RS14755 0.19 -2.1 3,096,210 + BWI76_RS14755 0.35 +0.4 3,096,482 - BWI76_RS14755 0.71 -0.5 3,096,482 - BWI76_RS14755 0.71 +0.5 3,096,647 - +0.1 3,096,859 - BWI76_RS14760 0.11 +0.6
Or see this region's nucleotide sequence