Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12895

Experiment: RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
2,685,327	+		BWI76_RS12885	0.79	+0.5
2,685,329	+		BWI76_RS12885	0.80	-1.1
2,685,337	-		BWI76_RS12885	0.81	+0.1
2,685,355	-		BWI76_RS12885	0.86	+0.6
2,685,383	+				-1.1
2,685,730	+		BWI76_RS12890	0.26	+0.9
2,685,903	+		BWI76_RS12890	0.63	-1.4
2,685,958	-		BWI76_RS12890	0.75	+1.6
2,686,253	-				-1.2
2,686,259	-				+0.9
2,686,259	-				-1.1
2,686,322	-		BWI76_RS12895	0.26	-1.1
2,686,322	-		BWI76_RS12895	0.26	-2.4
2,686,394	+		BWI76_RS12895	0.50	+0.5
2,686,432	-		BWI76_RS12895	0.62	-2.0
2,686,434	-		BWI76_RS12895	0.63	-0.9
2,686,469	-		BWI76_RS12895	0.75	-0.3
2,686,546	-				+2.3
2,686,620	+				-1.7
2,686,620	+				-1.3
2,686,620	+				+0.2
2,686,620	+				-0.1
2,686,628	-				+2.1
2,686,628	-				-2.1
2,686,727	-				-0.9
2,686,727	-				-0.1
2,686,733	-				+0.8
2,686,906	-		BWI76_RS12900	0.10	-0.4
2,686,932	+		BWI76_RS12900	0.12	+0.8
2,687,030	-		BWI76_RS12900	0.18	-1.8
2,687,030	-		BWI76_RS12900	0.18	-1.5
2,687,035	-		BWI76_RS12900	0.18	-0.7
2,687,061	-		BWI76_RS12900	0.20	-0.9
2,687,521	-		BWI76_RS12900	0.48	-1.1