Strain Fitness in Sinorhizobium meliloti 1021 around SMa1635

Experiment: Lactulose (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 nt SMa1635: SMa1635 - hypothetical protein, at 910,181 to 910,639 SMa1635 Position (kb) 910 911Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 909.212 kb on + strandat 909.411 kb on + strandat 909.411 kb on + strandat 909.412 kb on - strandat 909.412 kb on - strandat 909.413 kb on + strandat 909.413 kb on + strandat 909.413 kb on + strandat 909.414 kb on - strandat 909.414 kb on - strandat 909.419 kb on - strandat 909.535 kb on + strandat 909.597 kb on + strandat 909.612 kb on + strandat 909.613 kb on - strandat 909.733 kb on + strandat 909.734 kb on - strandat 909.735 kb on + strandat 909.735 kb on + strandat 909.735 kb on + strandat 909.736 kb on - strandat 909.926 kb on + strandat 909.927 kb on - strandat 909.927 kb on - strandat 909.977 kb on + strandat 909.978 kb on - strandat 909.978 kb on - strandat 909.978 kb on - strandat 910.002 kb on + strandat 910.094 kb on - strandat 910.095 kb on + strandat 910.095 kb on + strandat 910.095 kb on + strandat 910.095 kb on + strandat 910.096 kb on - strandat 910.187 kb on + strandat 910.330 kb on + strand, within SMa1635at 910.927 kb on + strandat 911.056 kb on + strandat 911.069 kb on - strandat 911.089 kb on + strandat 911.115 kb on - strandat 911.141 kb on - strandat 911.172 kb on + strandat 911.217 kb on + strandat 911.217 kb on + strandat 911.217 kb on + strandat 911.218 kb on - strandat 911.218 kb on - strandat 911.246 kb on - strandat 911.255 kb on + strandat 911.256 kb on - strandat 911.279 kb on + strandat 911.389 kb on + strandat 911.390 kb on - strandat 911.397 kb on + strandat 911.398 kb on - strandat 911.408 kb on - strandat 911.534 kb on - strandat 911.619 kb on - strandat 911.620 kb on + strandat 911.620 kb on + strandat 911.621 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Lactulose (C)
remove
909,212 + -0.1
909,411 + +0.6
909,411 + +0.5
909,412 - +0.5
909,412 - -0.2
909,413 + -0.3
909,413 + -1.9
909,413 + +0.3
909,414 - -0.5
909,414 - +0.7
909,419 - -0.2
909,535 + -0.4
909,597 + -1.0
909,612 + +0.0
909,613 - +0.0
909,733 + +0.1
909,734 - +0.4
909,735 + -0.4
909,735 + +0.4
909,735 + +0.3
909,736 - +0.5
909,926 + -0.1
909,927 - +0.3
909,927 - +0.1
909,977 + +0.2
909,978 - -0.4
909,978 - -0.2
909,978 - -0.1
910,002 + +0.1
910,094 - -0.0
910,095 + +0.2
910,095 + -0.0
910,095 + -0.1
910,095 + -0.6
910,096 - -0.3
910,187 + -0.7
910,330 + SMa1635 0.32 -5.2
910,927 + -0.8
911,056 + +0.0
911,069 - +0.3
911,089 + -2.4
911,115 - -0.5
911,141 - +1.3
911,172 + -0.4
911,217 + +0.5
911,217 + +0.1
911,217 + -0.3
911,218 - -0.4
911,218 - -0.9
911,246 - -0.2
911,255 + +0.0
911,256 - -0.7
911,279 + +0.0
911,389 + +0.2
911,390 - +0.2
911,397 + +0.4
911,398 - +0.1
911,408 - -1.2
911,534 - +0.0
911,619 - -0.1
911,620 + -0.3
911,620 + +0.2
911,621 - +0.1

Or see this region's nucleotide sequence