Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20535

Experiment: RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
4,299,979	-		BWI76_RS20525	0.62	-1.5
4,300,019	+		BWI76_RS20525	0.66	+0.5
4,300,207	+		BWI76_RS20525	0.85	+0.5
4,300,215	-		BWI76_RS20525	0.85	+1.7
4,300,215	-		BWI76_RS20525	0.85	+0.4
4,300,241	+		BWI76_RS20525	0.88	+0.3
4,300,275	+				-0.1
4,300,417	-				-2.8
4,300,434	+				+0.6
4,300,447	+				-0.5
4,300,488	-				+0.4
4,300,563	+		BWI76_RS20530	0.20	+0.6
4,300,704	-		BWI76_RS20530	0.59	+0.4
4,300,726	+		BWI76_RS20530	0.66	-0.6
4,301,402	+		BWI76_RS20535	0.41	+1.4
4,302,305	-				-0.8
4,302,307	+				+2.0
4,302,479	+				-0.6
4,302,479	+				+2.2
4,302,646	-		BWI76_RS20540	0.14	-1.0
4,302,737	+		BWI76_RS20540	0.21	-2.5
4,302,854	-		BWI76_RS20540	0.31	-0.5
4,302,889	+		BWI76_RS20540	0.34	-0.4