Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17850

Experiment: RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
3,709,953	+		BWI76_RS17845	0.72	+0.1
3,709,961	-		BWI76_RS17845	0.73	+0.6
3,710,027	-		BWI76_RS17845	0.78	-0.5
3,710,108	+		BWI76_RS17845	0.84	+1.1
3,710,116	-		BWI76_RS17845	0.85	+1.6
3,710,214	+				-0.7
3,710,214	+				-0.0
3,710,214	+				+1.4
3,710,223	+				+3.5
3,710,230	-				-1.8
3,710,231	-				+1.3
3,710,239	+				+1.0
3,710,249	+				+0.1
3,710,249	+				-1.3
3,710,249	+				-0.0
3,710,249	+				+0.4
3,710,252	-				+0.9
3,710,252	-				+0.4
3,710,252	-				+0.6
3,710,255	+				-0.0
3,710,255	+				-2.6
3,710,257	-				-1.8
3,710,257	-				-0.0
3,710,257	-				-0.7
3,710,257	-				+2.6
3,710,257	-				+0.2
3,710,257	-				-0.5
3,710,257	-				+0.5
3,710,257	-				-1.6
3,710,257	-				+0.3
3,710,257	-				+0.3
3,710,257	-				-0.9
3,710,257	-				-0.6
3,710,257	-				-0.5
3,710,257	-				-0.9
3,710,263	-				-0.8
3,710,263	-				-0.4
3,710,263	-				+0.2
3,710,263	-				-0.3
3,710,263	-				+0.2
3,710,263	-				-1.3
3,710,263	-				-1.0
3,710,263	-				-0.4
3,710,307	+				-0.6
3,710,307	+				-1.8
3,710,313	-				+0.1
3,710,385	+				-1.2
3,710,701	+				+0.3
3,710,701	+				-1.0
3,710,709	-				-1.1
3,710,818	+				+1.0
3,710,833	-				+0.7
3,710,839	+				+1.0
3,710,839	+				+0.3
3,710,839	+				-0.6
3,710,839	+				+1.0
3,710,847	-				+0.1
3,710,847	-				-1.3
3,710,847	-				-1.0
3,710,847	-				-0.9
3,710,847	-				-0.6
3,710,847	-				-0.6
3,710,848	-				-1.2
3,710,857	-				-1.0
3,710,859	+				+0.5
3,710,861	+				-0.0
3,710,867	-				-0.6
3,710,869	-				+0.4
3,710,871	+				-0.7
3,710,876	+				-0.0
3,710,876	+				-1.0
3,710,879	-				-0.6
3,710,911	-				-0.0
3,710,921	-				-0.0
3,710,923	+				-1.3
3,710,923	-				+0.4
3,711,132	+		BWI76_RS17850	0.24	-0.6
3,711,133	-		BWI76_RS17850	0.24	-0.5
3,711,135	-		BWI76_RS17850	0.24	-0.4
3,711,142	+		BWI76_RS17850	0.25	+0.5
3,711,308	+		BWI76_RS17850	0.38	-0.3
3,711,310	-		BWI76_RS17850	0.38	-0.6
3,711,427	-		BWI76_RS17850	0.48	-1.9
3,711,460	-		BWI76_RS17850	0.50	-0.0
3,711,487	+				+1.0
3,711,541	+		BWI76_RS17850	0.57	-0.5
3,711,756	+		BWI76_RS17850	0.74	-0.7
3,711,831	-		BWI76_RS17850	0.80	+1.3
3,711,848	-		BWI76_RS17850	0.82	-0.2
3,712,068	-				+4.5
3,712,250	-				-0.6
3,712,456	+		BWI76_RS17855	0.19	-2.2
3,712,484	+		BWI76_RS17855	0.20	-1.3
3,712,570	-		BWI76_RS17855	0.24	-0.6
3,712,622	+		BWI76_RS17855	0.27	+1.0
3,712,832	-		BWI76_RS17855	0.37	+0.3
3,712,936	-		BWI76_RS17855	0.42	-0.0
3,713,040	+		BWI76_RS17855	0.48	+0.4