Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08100

Experiment: RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
1,716,179	+				+0.6
1,716,184	+				-0.9
1,716,184	+				-1.4
1,716,253	+				+0.5
1,716,260	+				+0.3
1,716,292	-				-1.4
1,716,339	-				-0.0
1,716,342	-				-1.0
1,716,372	-				-0.8
1,716,373	-				-0.0
1,716,373	-				+0.5
1,716,385	-				+1.1
1,716,396	-				+0.8
1,716,407	+				-1.0
1,716,407	+				-0.8
1,716,415	-				-0.1
1,716,460	-		BWI76_RS08095	0.13	-2.5
1,716,462	+		BWI76_RS08095	0.13	-0.4
1,716,530	-		BWI76_RS08095	0.22	-0.1
1,716,537	-		BWI76_RS08095	0.23	+1.2
1,716,590	-		BWI76_RS08095	0.31	+1.0
1,716,599	+		BWI76_RS08095	0.32	+1.0
1,716,626	-		BWI76_RS08095	0.36	-1.7
1,716,638	-		BWI76_RS08095	0.37	-0.1
1,716,677	+		BWI76_RS08095	0.43	+0.4
1,716,685	-		BWI76_RS08095	0.44	-0.4
1,716,779	+		BWI76_RS08095	0.57	+1.0
1,716,780	-		BWI76_RS08095	0.57	-0.5
1,716,787	-		BWI76_RS08095	0.58	-0.5
1,716,787	-		BWI76_RS08095	0.58	-0.0
1,716,787	-		BWI76_RS08095	0.58	-0.2
1,716,839	-		BWI76_RS08095	0.65	-3.0
1,716,927	-		BWI76_RS08095	0.77	+0.0
1,716,976	+		BWI76_RS08095	0.84	-1.4
1,717,097	-				-0.4
1,717,246	+		BWI76_RS08100	0.23	+0.4
1,717,357	+		BWI76_RS08100	0.39	-1.0
1,717,357	+		BWI76_RS08100	0.39	-0.5
1,717,365	-		BWI76_RS08100	0.40	+0.4
1,717,365	-		BWI76_RS08100	0.40	-0.4
1,717,386	-		BWI76_RS08100	0.44	-0.7
1,717,699	+				-1.4
1,717,856	+		BWI76_RS08105	0.12	-0.0
1,717,883	+		BWI76_RS08105	0.16	+0.0
1,717,906	-		BWI76_RS08105	0.19	+0.5
1,718,024	-		BWI76_RS08105	0.35	-0.5
1,718,034	-		BWI76_RS08105	0.36	-0.6
1,718,122	+		BWI76_RS08105	0.48	-0.1
1,718,210	-		BWI76_RS08105	0.60	-0.7
1,718,244	-		BWI76_RS08105	0.65	-0.3
1,718,333	+		BWI76_RS08105	0.77	-0.6
1,718,416	+		BWI76_RS08105	0.88	+1.0
1,718,703	-				+0.3