Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05545

Experiment: RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
1,161,387	+		BWI76_RS05540	0.54	-0.9
1,161,387	+		BWI76_RS05540	0.54	+1.9
1,161,387	+		BWI76_RS05540	0.54	-0.3
1,161,395	-		BWI76_RS05540	0.54	+0.2
1,161,395	-		BWI76_RS05540	0.54	+0.6
1,161,395	-		BWI76_RS05540	0.54	-0.9
1,161,535	+		BWI76_RS05540	0.64	-0.1
1,161,537	-		BWI76_RS05540	0.64	-0.0
1,161,826	+		BWI76_RS05540	0.84	-1.0
1,161,948	+				-0.8
1,161,995	+				+0.7
1,162,151	+				-1.5
1,162,185	+				+0.5
1,162,193	-				-2.1
1,162,256	-				-0.5
1,162,302	-				+1.1
1,162,304	+				-0.4
1,162,312	-				-0.3
1,162,312	-				-0.2
1,162,314	-				-0.9
1,162,728	-		BWI76_RS05545	0.89	-1.5
1,162,989	-				-0.3
1,163,186	+		BWI76_RS05550	0.24	-1.7
1,163,257	-		BWI76_RS05550	0.30	-0.5
1,163,370	+		BWI76_RS05550	0.39	-0.8
1,163,542	-		BWI76_RS05550	0.53	+0.2
1,163,577	-		BWI76_RS05550	0.56	+0.1
1,163,607	+		BWI76_RS05550	0.58	-0.1
1,163,768	+		BWI76_RS05550	0.71	-1.3
1,163,776	-		BWI76_RS05550	0.72	-1.2
1,163,776	-		BWI76_RS05550	0.72	-0.5