Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21795

Experiment: RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
4,552,484	-		BWI76_RS21785	0.58	+0.3
4,552,497	+		BWI76_RS21785	0.60	-0.8
4,552,516	+		BWI76_RS21785	0.63	-1.4
4,552,524	-		BWI76_RS21785	0.65	-0.2
4,552,565	+		BWI76_RS21785	0.71	-2.5
4,552,566	+		BWI76_RS21785	0.72	-0.5
4,552,568	-		BWI76_RS21785	0.72	+2.3
4,552,573	-		BWI76_RS21785	0.73	-1.3
4,552,578	-		BWI76_RS21785	0.74	+0.5
4,552,682	-				+0.4
4,552,686	+				-1.0
4,552,707	+				-0.2
4,552,723	-				-0.5
4,552,738	-				+3.1
4,552,739	+				-2.0
4,552,749	+				+0.7
4,552,755	+				+1.0
4,552,755	+				-0.6
4,552,756	-				+0.5
4,552,763	-				+0.5
4,552,770	+				+0.5
4,552,770	+				+0.3
4,552,770	+				-0.3
4,552,770	+				+0.6
4,552,770	+				-1.9
4,552,770	+				+0.4
4,552,770	+				-1.2
4,552,770	+				+1.5
4,552,770	+				+0.8
4,552,770	+				-1.7
4,552,770	+				-1.1
4,552,770	+				-1.5
4,552,770	+				+0.5
4,552,770	+				-0.1
4,552,770	+				+0.1
4,552,770	+				-0.5
4,552,778	-				-2.2
4,552,778	-				-1.0
4,552,778	-				-2.7
4,552,778	-				+0.5
4,552,778	-				-1.0
4,552,778	-				-0.6
4,552,778	-				-1.6
4,552,778	-				-1.0
4,552,778	-				-0.0
4,552,778	-				+0.5
4,552,778	-				-0.2
4,552,778	-				-0.5
4,552,778	-				-0.0
4,552,778	-				-0.9
4,552,778	-				-0.8
4,552,788	-				-0.5
4,552,788	-				-1.5
4,552,789	-				-0.5
4,552,807	+				-1.5
4,552,811	+				+0.7
4,552,815	-				-2.0
4,552,822	+				+1.2
4,552,822	+				-0.6
4,552,831	+				-1.0
4,552,841	+				+0.2
4,552,841	+				+0.3
4,552,869	-				+1.5
4,552,899	-				-0.6
4,552,916	+				-2.8
4,552,917	+				+1.5
4,552,922	+				-1.0
4,552,924	+				+0.5
4,552,924	+				-0.8
4,552,924	+				+0.4
4,552,932	+				-1.5
4,552,932	-				-1.5
4,552,932	-				+0.7
4,552,932	-				-0.5
4,552,939	+				-0.8
4,552,949	-				+0.9
4,552,951	+				+0.5
4,552,964	+				+0.5
4,552,975	+				-1.0
4,552,988	-				-0.8
4,553,038	+				+2.1
4,553,208	-				+0.5
4,553,208	-		BWI76_RS21790	0.37	+0.5
4,553,265	-		BWI76_RS21790	0.54	+0.5
4,553,270	-		BWI76_RS21790	0.56	-1.3
4,553,666	-		BWI76_RS21795	0.36	+0.5
4,553,712	+		BWI76_RS21795	0.42	-0.6
4,553,845	-		BWI76_RS21795	0.62	-0.6
4,553,929	-		BWI76_RS21795	0.74	-0.5
4,553,967	+		BWI76_RS21795	0.79	-0.4
4,553,975	-		BWI76_RS21795	0.80	-2.2
4,554,062	+				+3.1
4,554,107	-				-2.0
4,554,107	-				-0.5
4,554,210	+				-0.5
4,554,328	-				-2.0
4,554,333	-				-1.6
4,554,335	-				-0.5
4,554,338	+				-1.0
4,554,338	-				-0.3
4,554,340	-				+1.1
4,554,340	-				-1.3
4,554,340	-				-0.0
4,554,346	-				+1.5
4,554,346	-				+0.2
4,554,455	+				-1.1
4,554,477	-				+1.5
4,554,675	-		BWI76_RS21800	0.20	-0.2
4,554,726	+		BWI76_RS21800	0.25	+1.1
4,554,726	+		BWI76_RS21800	0.25	+0.5
4,554,736	-		BWI76_RS21800	0.26	-0.0
4,554,741	-		BWI76_RS21800	0.27	-1.6
4,554,751	+				-1.3
4,554,759	-		BWI76_RS21800	0.28	+0.2
4,554,759	-		BWI76_RS21800	0.28	-0.8
4,554,759	-		BWI76_RS21800	0.28	-0.0
4,554,773	-		BWI76_RS21800	0.30	-0.0
4,555,013	-		BWI76_RS21800	0.52	-1.0
4,555,016	-				+1.5
4,555,029	-		BWI76_RS21800	0.54	+0.1
4,555,044	-		BWI76_RS21800	0.55	+1.5
4,555,045	-		BWI76_RS21800	0.55	-0.0
4,555,046	+		BWI76_RS21800	0.56	+0.2
4,555,054	-		BWI76_RS21800	0.56	-0.8
4,555,054	-		BWI76_RS21800	0.56	-0.7
4,555,054	-		BWI76_RS21800	0.56	+0.7