Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07425

Experiment: RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
1,565,984	+		BWI76_RS07415	0.69	+0.1
1,565,984	+		BWI76_RS07415	0.69	-1.1
1,565,984	+		BWI76_RS07415	0.69	-0.8
1,565,984	+		BWI76_RS07415	0.69	-0.6
1,565,984	+				+0.4
1,565,989	+		BWI76_RS07415	0.70	-0.4
1,565,992	-		BWI76_RS07415	0.71	-1.4
1,565,992	-		BWI76_RS07415	0.71	-0.6
1,565,992	-		BWI76_RS07415	0.71	+0.4
1,565,992	-		BWI76_RS07415	0.71	-0.4
1,565,998	-		BWI76_RS07415	0.71	-0.7
1,565,998	-		BWI76_RS07415	0.71	-1.7
1,566,000	+		BWI76_RS07415	0.72	-0.1
1,566,001	+		BWI76_RS07415	0.72	+0.1
1,566,008	-		BWI76_RS07415	0.73	-1.1
1,566,013	+		BWI76_RS07415	0.74	-0.8
1,566,015	+		BWI76_RS07415	0.74	+1.0
1,566,015	+		BWI76_RS07415	0.74	-0.9
1,566,015	-		BWI76_RS07415	0.74	-0.3
1,566,020	+		BWI76_RS07415	0.75	-1.3
1,566,020	+		BWI76_RS07415	0.75	-1.9
1,566,020	+		BWI76_RS07415	0.75	-2.4
1,566,020	+		BWI76_RS07415	0.75	-1.4
1,566,020	+		BWI76_RS07415	0.75	+1.0
1,566,020	+		BWI76_RS07415	0.75	+1.4
1,566,020	+		BWI76_RS07415	0.75	-0.4
1,566,020	+		BWI76_RS07415	0.75	-1.9
1,566,020	+		BWI76_RS07415	0.75	+0.3
1,566,020	+		BWI76_RS07415	0.75	-0.3
1,566,020	+		BWI76_RS07415	0.75	-1.7
1,566,020	+		BWI76_RS07415	0.75	-0.7
1,566,020	+		BWI76_RS07415	0.75	-0.6
1,566,020	+		BWI76_RS07415	0.75	-1.9
1,566,020	+		BWI76_RS07415	0.75	-0.5
1,566,020	+		BWI76_RS07415	0.75	+1.4
1,566,020	+		BWI76_RS07415	0.75	-0.4
1,566,020	+		BWI76_RS07415	0.75	-0.3
1,566,023	-		BWI76_RS07415	0.75	-0.1
1,566,028	-		BWI76_RS07415	0.76	+0.3
1,566,028	-		BWI76_RS07415	0.76	-1.6
1,566,028	-		BWI76_RS07415	0.76	-0.9
1,566,028	-		BWI76_RS07415	0.76	-0.9
1,566,028	-		BWI76_RS07415	0.76	+0.1
1,566,032	+		BWI76_RS07415	0.76	-0.9
1,566,032	+		BWI76_RS07415	0.76	-1.7
1,566,032	+		BWI76_RS07415	0.76	-0.6
1,566,032	+		BWI76_RS07415	0.76	-2.1
1,566,032	+		BWI76_RS07415	0.76	-0.7
1,566,040	-		BWI76_RS07415	0.78	+0.2
1,566,040	-		BWI76_RS07415	0.78	-1.7
1,566,047	+		BWI76_RS07415	0.79	-0.3
1,566,049	+		BWI76_RS07415	0.79	-2.6
1,566,080	+		BWI76_RS07415	0.83	-0.3
1,566,080	+		BWI76_RS07415	0.83	+0.2
1,566,080	+		BWI76_RS07415	0.83	-1.4
1,566,088	+		BWI76_RS07415	0.85	-0.4
1,566,098	+		BWI76_RS07415	0.86	-0.3
1,566,116	-		BWI76_RS07415	0.89	+0.8
1,566,122	+		BWI76_RS07415	0.90	-0.8
1,566,129	-				-0.6
1,566,131	+				-2.7
1,566,139	-				-1.4
1,566,139	-				+1.4
1,566,199	+				-0.1
1,566,200	+				-0.9
1,566,200	+				-1.1
1,566,200	+				+0.9
1,566,200	+				-0.0
1,566,200	+				-0.9
1,566,200	+				-0.6
1,566,200	+				-1.0
1,566,200	+				-0.4
1,566,200	+				+0.2
1,566,200	+				+0.9
1,566,200	+				-1.9
1,566,200	+				+0.5
1,566,200	+				-1.6
1,566,200	+				-0.7
1,566,208	-				-0.2
1,566,208	-				-1.4
1,566,208	-				+1.4
1,566,208	-				-1.4
1,566,208	-				-1.6
1,566,208	-				-2.8
1,566,208	-				+0.6
1,566,208	-				+1.4
1,566,208	-				-0.4
1,566,208	-				-0.3
1,566,210	+				+0.6
1,566,231	+				-1.7
1,566,236	-				+1.4
1,566,238	+				+0.4
1,566,238	+				-2.3
1,566,238	+				+1.4
1,566,238	+				-0.6
1,566,238	+				-1.6
1,566,238	+				-3.3
1,566,238	+				+0.5
1,566,238	+				+0.4
1,566,238	+				+0.8
1,566,238	+				+2.0
1,566,238	+				-0.9
1,566,238	+				+0.9
1,566,238	+				+2.4
1,566,238	+				-0.6
1,566,238	+				-2.5
1,566,238	+				-1.3
1,566,239	+				-0.9
1,566,241	-				+0.4
1,566,241	-				+0.4
1,566,244	+				-2.1
1,566,244	+				-0.9
1,566,244	+				-0.1
1,566,246	-				+0.2
1,566,246	-				-0.1
1,566,246	-				+0.3
1,566,246	-				+0.0
1,566,246	-				-0.4
1,566,246	-				-0.1
1,566,246	-				-0.8
1,566,246	-				+1.3
1,566,246	-				+0.1
1,566,246	-				+0.3
1,566,246	-				-0.1
1,566,246	-				-0.3
1,566,246	-				+0.6
1,566,246	-				-0.0
1,566,247	-				+0.0
1,566,249	+				+1.4
1,566,249	+				+0.6
1,566,252	-				+0.1
1,566,252	-				+1.1
1,566,252	-				+0.4
1,566,252	-				+0.3
1,566,252	-				+0.2
1,566,257	-				-0.0
1,566,280	-				-1.9
1,566,280	-				+0.0
1,566,280	-				+0.9
1,566,320	+		BWI76_RS07420	0.11	-2.6
1,566,353	-		BWI76_RS07420	0.17	+1.2
1,566,377	+		BWI76_RS07420	0.21	-0.3
1,566,415	+		BWI76_RS07420	0.27	+0.9
1,566,514	+		BWI76_RS07420	0.45	-1.4
1,566,531	+		BWI76_RS07420	0.47	-4.0
1,566,560	-		BWI76_RS07420	0.53	-0.6
1,566,561	-		BWI76_RS07420	0.53	+3.0
1,566,585	+		BWI76_RS07420	0.57	+1.4
1,566,609	+		BWI76_RS07420	0.61	+1.4
1,566,610	+		BWI76_RS07420	0.61	+0.4
1,566,618	-				-0.1
1,566,645	-		BWI76_RS07420	0.67	+0.8
1,566,661	-		BWI76_RS07420	0.70	+0.4
1,566,662	-		BWI76_RS07420	0.70	-0.9
1,566,698	+		BWI76_RS07420	0.76	+2.3
1,566,706	-		BWI76_RS07420	0.78	+0.5
1,566,706	-		BWI76_RS07420	0.78	-1.4
1,566,726	-		BWI76_RS07420	0.81	+0.1
1,566,729	-		BWI76_RS07420	0.82	-1.8
1,566,761	+		BWI76_RS07420	0.87	+1.4
1,566,775	-		BWI76_RS07420	0.90	-1.4
1,566,790	+				-2.6
1,566,790	+				-0.1
1,566,790	+				+0.4
1,566,790	+				+0.4
1,566,790	+				-0.8
1,566,790	+				-0.6
1,566,798	-				+1.4
1,566,798	-				+0.4
1,566,798	-				+0.4
1,566,798	-				+0.4
1,566,798	-				+0.6
1,566,798	-				-0.3
1,566,798	-				+1.2
1,566,798	-				-0.6
1,566,798	-				+0.9
1,566,877	-				-0.9
1,566,893	-				-1.4
1,566,910	-				+0.9
1,566,910	-				-1.6
1,566,910	-				-0.9
1,566,910	-				+0.0
1,566,936	-				+1.0
1,566,946	-				-0.1
1,566,953	-				+0.6
1,566,953	-				-1.7
1,566,965	-				-1.0
1,566,967	-		BWI76_RS07425	0.10	+0.6
1,566,970	-		BWI76_RS07425	0.11	+1.4
1,567,042	-		BWI76_RS07425	0.22	+1.4
1,567,080	-		BWI76_RS07425	0.28	-1.2
1,567,104	-		BWI76_RS07425	0.32	+1.4
1,567,146	-		BWI76_RS07425	0.39	+1.0
1,567,191	+		BWI76_RS07425	0.46	-1.5
1,567,191	+		BWI76_RS07425	0.46	-0.1
1,567,191	+		BWI76_RS07425	0.46	-0.6
1,567,192	-		BWI76_RS07425	0.46	-1.1
1,567,196	+		BWI76_RS07425	0.47	+0.8
1,567,196	+		BWI76_RS07425	0.47	-1.7
1,567,199	-		BWI76_RS07425	0.48	-0.9
1,567,199	-		BWI76_RS07425	0.48	-0.6
1,567,199	-		BWI76_RS07425	0.48	-1.6
1,567,199	-		BWI76_RS07425	0.48	-0.6
1,567,199	-		BWI76_RS07425	0.48	-0.1
1,567,199	-		BWI76_RS07425	0.48	-1.6
1,567,199	-		BWI76_RS07425	0.48	-1.6
1,567,199	-		BWI76_RS07425	0.48	-1.6
1,567,199	-		BWI76_RS07425	0.48	-0.9
1,567,199	-		BWI76_RS07425	0.48	-2.1
1,567,199	-		BWI76_RS07425	0.48	+0.4
1,567,199	-		BWI76_RS07425	0.48	+1.4
1,567,199	-		BWI76_RS07425	0.48	+1.4
1,567,199	-		BWI76_RS07425	0.48	+1.4
1,567,199	-		BWI76_RS07425	0.48	-2.0
1,567,199	-		BWI76_RS07425	0.48	-1.4
1,567,204	-		BWI76_RS07425	0.48	+0.0
1,567,211	-				+1.4
1,567,213	+		BWI76_RS07425	0.50	-0.1
1,567,221	-		BWI76_RS07425	0.51	-0.1
1,567,259	-		BWI76_RS07425	0.57	-0.9
1,567,474	+				-1.6
1,567,474	+				-2.3
1,567,474	+				-0.7
1,567,474	+				-1.3
1,567,474	+				-0.9
1,567,482	-				+1.3
1,567,668	+				+0.4
1,567,676	-				-0.4
1,567,676	-				+0.4
1,567,753	-				-0.1
1,567,880	-				+0.2
1,567,888	+				-1.1
1,567,972	+				-1.4
1,567,984	+				-0.4
1,568,037	+				-2.0
1,568,090	+				+0.3
1,568,098	-				-0.1
1,568,099	-				-0.6
1,568,100	+				-0.6
1,568,103	-				-3.2
1,568,105	+				-1.9
1,568,202	+				-0.4
1,568,223	+				-0.9
1,568,278	+		BWI76_RS07430	0.20	-3.3
1,568,286	-		BWI76_RS07430	0.22	+0.2
1,568,322	-		BWI76_RS07430	0.32	+0.0
1,568,368	+		BWI76_RS07430	0.44	-0.2
1,568,370	-		BWI76_RS07430	0.45	-0.9
1,568,502	+		BWI76_RS07430	0.80	-1.0
1,568,510	-		BWI76_RS07430	0.82	-0.4