Experiment: MoYLS4 with Chlorite 250uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2839 and DVU2840 are separated by 108 nucleotides DVU2840 and DVU2841 overlap by 1 nucleotides DVU2841 and dcm are separated by 139 nucleotides
DVU2839: DVU2839 - conserved hypothetical protein (TIGR), at 2,943,651 to 2,944,175
DVU2839
DVU2840: DVU2840 - conserved hypothetical protein (TIGR), at 2,944,284 to 2,944,985
DVU2840
DVU2841: DVU2841 - type II restriction endonuclease, putative (TIGR), at 2,944,985 to 2,946,184
DVU2841
DVU2842: dcm - type II DNA modification methyltransferase, putative (TIGR), at 2,946,324 to 2,947,400
dcm
Position (kb)
2944
2945
2946
2947 Strain fitness (log2 ratio)
-2
-1
0
1 at 2943.988 kb on + strand, within DVU2839 at 2944.091 kb on + strand, within DVU2839 at 2944.112 kb on + strand, within DVU2839 at 2944.803 kb on + strand, within DVU2840 at 2945.136 kb on - strand, within DVU2841 at 2945.330 kb on - strand, within DVU2841 at 2945.349 kb on + strand, within DVU2841 at 2945.368 kb on + strand, within DVU2841 at 2945.437 kb on + strand, within DVU2841 at 2945.437 kb on - strand, within DVU2841 at 2945.447 kb on + strand, within DVU2841 at 2945.467 kb on - strand, within DVU2841 at 2945.490 kb on - strand, within DVU2841 at 2945.505 kb on + strand, within DVU2841 at 2945.521 kb on + strand, within DVU2841 at 2945.537 kb on + strand, within DVU2841 at 2945.663 kb on + strand, within DVU2841 at 2945.843 kb on - strand, within DVU2841 at 2945.914 kb on - strand, within DVU2841 at 2945.930 kb on + strand, within DVU2841 at 2945.960 kb on + strand, within DVU2841 at 2945.970 kb on + strand, within DVU2841 at 2946.128 kb on - strand at 2946.146 kb on + strand at 2946.172 kb on - strand at 2946.285 kb on - strand at 2946.293 kb on - strand at 2946.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chlorite 250uM remove 2,943,988 + DVU2839 0.64 -0.3 2,944,091 + DVU2839 0.84 +0.4 2,944,112 + DVU2839 0.88 -0.3 2,944,803 + DVU2840 0.74 -0.2 2,945,136 - DVU2841 0.13 -0.9 2,945,330 - DVU2841 0.29 -1.5 2,945,349 + DVU2841 0.30 +0.3 2,945,368 + DVU2841 0.32 -1.3 2,945,437 + DVU2841 0.38 -1.4 2,945,437 - DVU2841 0.38 -1.0 2,945,447 + DVU2841 0.39 -0.3 2,945,467 - DVU2841 0.40 -0.6 2,945,490 - DVU2841 0.42 -1.1 2,945,505 + DVU2841 0.43 +0.0 2,945,521 + DVU2841 0.45 -0.4 2,945,537 + DVU2841 0.46 -0.6 2,945,663 + DVU2841 0.56 -0.3 2,945,843 - DVU2841 0.71 -0.3 2,945,914 - DVU2841 0.77 -0.1 2,945,930 + DVU2841 0.79 -1.8 2,945,960 + DVU2841 0.81 +0.4 2,945,970 + DVU2841 0.82 -1.3 2,946,128 - +1.3 2,946,146 + +0.4 2,946,172 - +0.2 2,946,285 - -1.0 2,946,293 - +0.1 2,946,316 - +0.0
Or see this region's nucleotide sequence