Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12195

Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
2,552,502	-				+0.9
2,552,596	+		BWI76_RS12185	0.29	-0.1
2,552,606	-		BWI76_RS12185	0.33	-0.6
2,552,653	-		BWI76_RS12185	0.50	+0.9
2,553,015	+				-3.5
2,553,033	+		BWI76_RS12190	0.37	-0.2
2,553,033	+		BWI76_RS12190	0.37	-0.4
2,553,036	-		BWI76_RS12190	0.37	+0.9
2,553,036	-		BWI76_RS12190	0.37	-2.1
2,553,045	+				-0.1
2,553,047	+		BWI76_RS12190	0.39	+0.2
2,553,054	+				+0.6
2,553,081	-		BWI76_RS12190	0.45	-2.0
2,553,140	-		BWI76_RS12190	0.54	-1.8
2,553,140	-		BWI76_RS12190	0.54	-0.2
2,553,160	-		BWI76_RS12190	0.57	-0.3
2,553,160	-		BWI76_RS12190	0.57	-0.8
2,553,287	-		BWI76_RS12190	0.77	+0.2
2,553,287	-		BWI76_RS12190	0.77	-1.9
2,553,289	+		BWI76_RS12190	0.78	-0.1
2,553,400	-				-0.5
2,553,496	+		BWI76_RS12195	0.23	-0.0
2,553,504	-		BWI76_RS12195	0.26	-0.6
2,553,553	-		BWI76_RS12195	0.44	-2.2
2,553,578	-		BWI76_RS12195	0.53	-0.1
2,553,615	-				+0.9
2,553,627	-		BWI76_RS12195	0.71	-1.2
2,553,719	+		BWI76_RS12200	0.31	-1.1
2,553,751	-		BWI76_RS12200	0.48	-0.0
2,553,856	+				-1.8
2,553,879	+		BWI76_RS12205	0.11	-0.4
2,553,968	+		BWI76_RS12205	0.42	-0.9
2,554,104	+		BWI76_RS12205	0.89	-1.3
2,554,127	+				+0.4
2,554,152	+				+0.1
2,554,160	-				-1.4
2,554,160	-				+0.5
2,554,160	-				-0.4
2,554,237	+				-0.9
2,554,245	-				-1.8
2,554,255	-				-0.0
2,554,279	+				+0.2
2,554,287	-				-0.5
2,554,287	-				-3.0
2,554,293	-				-3.4
2,554,294	+				-0.8
2,554,303	+				-0.4
2,554,308	+				-0.5
2,554,391	+				-0.5
2,554,399	-				+1.7
2,554,406	-				-1.0
2,554,406	-				-0.7
2,554,469	-				+1.1
2,554,505	-				+0.6
2,554,511	-				-0.9
2,554,513	-				-1.1
2,554,513	-				-2.6
2,554,516	+				-0.2
2,554,516	+				-0.6
2,554,516	+				-0.0
2,554,516	+				-0.6
2,554,516	+				-0.2
2,554,533	-				-1.1
2,554,543	-				-0.0
2,554,565	+				-1.0
2,554,571	+				-0.4
2,554,580	+				-0.2
2,554,580	+				+0.5
2,554,588	-				+1.0
2,554,689	+				+0.1
2,554,690	+				-0.6
2,554,694	+				-0.4
2,554,694	+				+0.2
2,554,699	+				-1.6